Literature DB >> 15365025

Simple chemical extraction method for DNA isolation from Aspergillus fumigatus and other Aspergillus species.

J Jin1, Y-K Lee, B L Wickes.   

Abstract

DNA was successfully isolated from numerous Aspergillus spp. by use of a commercial kit. DNA that was easily digested and yielded PCR products up to 8.5 kb in size was recovered from broth or agar cultures. The ease and speed of this protocol provide an alternative to physical methods of DNA isolation.

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Year:  2004        PMID： 15365025      PMCID： PMC516345          DOI： 10.1128/JCM.42.9.4293-4296.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  16 in total

Review 1.  Transformation systems of Aspergillus fumigatus. New tools to investigate fungal virulence.

Authors:  C d'Enfert; G Weidner; P C Mol; A A Brakhage
Journal:  Contrib Microbiol       Date:  1999

2.  Microsatellite analysis of environmental and clinical isolates of the opportunist fungal pathogen Aspergillus fumigatus.

Authors:  Kimberly Rosehart; Miriam H Richards; Michael J Bidochka
Journal:  J Med Microbiol       Date:  2002-12       Impact factor: 2.472

3.  Invasive aspergillosis in liver transplant recipients: outcome comparison of therapy with amphotericin B lipid complex and a historical cohort treated with conventional amphotericin B.

Authors:  Peter K Linden; Kim Coley; Paolo Fontes; John J Fung; Shimon Kusne
Journal:  Clin Infect Dis       Date:  2003-06-20       Impact factor: 9.079

4.  Molecular genetics in Aspergillus fumigatus.

Authors:  J L Brookman; D W Denning
Journal:  Curr Opin Microbiol       Date:  2000-10       Impact factor: 7.934

Review 5.  Fungal infections in patients undergoing blood and marrow transplantation.

Authors:  K A Marr; R A Bowden
Journal:  Transpl Infect Dis       Date:  1999-12       Impact factor: 2.228

Review 6.  Sequencing the Aspergillus fumigatus genome.

Authors:  David W Denning; Michael J Anderson; Geoffrey Turner; Jean Paul Latgé; Joan W Bennett
Journal:  Lancet Infect Dis       Date:  2002-04       Impact factor: 25.071

Review 7.  Menacing mold: the molecular biology of Aspergillus fumigatus.

Authors:  Axel A Brakhage; Kim Langfelder
Journal:  Annu Rev Microbiol       Date:  2002-01-30       Impact factor: 15.500

8.  Nosocomial pneumonia in patients having bone marrow transplant. Attributable mortality and risk factors.

Authors:  C Pannuti; R Gingrich; M A Pfaller; C Kao; R P Wenzel
Journal:  Cancer       Date:  1992-06-01       Impact factor: 6.860

9.  Molecular epidemiology of Aspergillus fumigatus isolates recovered from water, air, and patients shows two clusters of genetically distinct strains.

Authors:  Adilia Warris; Corné H W Klaassen; Jacques F G M Meis; Maaike T De Ruiter; Hanneke A De Valk; Tore G Abrahamsen; Peter Gaustad; Paul E Verweij
Journal:  J Clin Microbiol       Date:  2003-09       Impact factor: 5.948

Review 10.  Fungal infections in solid-organ transplantation.

Authors:  C V Paya
Journal:  Clin Infect Dis       Date:  1993-05       Impact factor: 9.079
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  15 in total

1.  Activation of a silent fungal polyketide biosynthesis pathway through regulatory cross talk with a cryptic nonribosomal peptide synthetase gene cluster.

Authors:  Sebastian Bergmann; Alexander N Funk; Kirstin Scherlach; Volker Schroeckh; Ekaterina Shelest; Uwe Horn; Christian Hertweck; Axel A Brakhage
Journal:  Appl Environ Microbiol       Date:  2010-10-15       Impact factor: 4.792

2.  Comparison of six DNA extraction methods for recovery of fungal DNA as assessed by quantitative PCR.

Authors:  David N Fredricks; Caitlin Smith; Amalia Meier
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

3.  First reported case of Gilbertella persicaria in human stool: outcome of a community study from Segamat, Johor, Malaysia.

Authors:  Marie Andrea Laetitia Huët; Li Wen Wong; Calvin Bok Sun Goh; Kuan Shion Ong; Jacky Dwiyanto; Daniel Reidpath; Sui Mae Lee; Sadequr Rahman; Joash Ban Lee Tan
Journal:  Braz J Microbiol       Date:  2020-06-23       Impact factor: 2.476

4.  The Aspergillus fumigatus cspA gene encoding a repeat-rich cell wall protein is important for normal conidial cell wall architecture and interaction with host cells.

Authors:  Emma Levdansky; Oren Kashi; Haim Sharon; Yana Shadkchan; Nir Osherov
Journal:  Eukaryot Cell       Date:  2010-07-23

5.  Aspergillus section Fumigati typing by PCR-restriction fragment polymorphism.

Authors:  Janet F Staab; S Arunmozhi Balajee; Kieren A Marr
Journal:  J Clin Microbiol       Date:  2009-04-29       Impact factor: 5.948

6.  Plasmids for increased efficiency of vector construction and genetic engineering in filamentous fungi.

Authors:  Taylor J Schoberle; C Kim Nguyen-Coleman; Gregory S May
Journal:  Fungal Genet Biol       Date:  2013-07-16       Impact factor: 3.495

7.  Assessment of Aspergillus fumigatus burden in pulmonary tissue of guinea pigs by quantitative PCR, galactomannan enzyme immunoassay, and quantitative culture.

Authors:  Ana C Vallor; William R Kirkpatrick; Laura K Najvar; Rosie Bocanegra; Marsha C Kinney; Annette W Fothergill; Monica L Herrera; Brian L Wickes; John R Graybill; Thomas F Patterson
Journal:  Antimicrob Agents Chemother       Date:  2008-05-12       Impact factor: 5.191

8.  Strain-dependent variation in 18S ribosomal DNA Copy numbers in Aspergillus fumigatus.

Authors:  M L Herrera; A C Vallor; J A Gelfond; T F Patterson; B L Wickes
Journal:  J Clin Microbiol       Date:  2009-03-04       Impact factor: 5.948

9.  Coding tandem repeats generate diversity in Aspergillus fumigatus genes.

Authors:  Emma Levdansky; Jacob Romano; Yona Shadkchan; Haim Sharon; Kevin J Verstrepen; Gerald R Fink; Nir Osherov
Journal:  Eukaryot Cell       Date:  2007-06-08

10.  VeA regulates conidiation, gliotoxin production, and protease activity in the opportunistic human pathogen Aspergillus fumigatus.

Authors:  Sourabh Dhingra; David Andes; Ana M Calvo
Journal:  Eukaryot Cell       Date:  2012-10-19
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