Literature DB >> 15364976

Comprehensive detection and serotyping of human adenoviruses by PCR and sequencing.

Helen Sarantis1, Grant Johnson, Martha Brown, Martin Petric, Raymond Tellier.   

Abstract

Human adenoviruses are common pathogens associated with many diseases, including respiratory, gastrointestinal, and ocular infections. Because they are now being increasingly recognized as agents of life-threatening disseminated infection in immunocompromised patients, robust and sensitive laboratory detection methods are needed for their rapid diagnosis. We describe here a PCR assay using a single primer pair, targeting a region of the hexon gene containing hypervariable region 7, that can detect all known human adenovirus serotypes and allows for serotype determination through the analysis of the nucleotide sequence. This comprehensive assay has proven effective for diagnosing adenoviruses at the serotype level in a broad range of patient specimens, including conjunctival, nasopharyngeal, stool, blood, and urine specimens.

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Year:  2004        PMID: 15364976      PMCID: PMC516336          DOI: 10.1128/JCM.42.9.3963-3969.2004

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  34 in total

1.  Detection and typing of respiratory adenoviruses in a single-tube multiplex polymerase chain reaction.

Authors:  Byoung-Kuk Na; Jee-Hee Kim; Gu-Choul Shin; Joo-Yeon Lee; Jin-Soo Lee; Chun Kang; Woo-Joo Kim
Journal:  J Med Virol       Date:  2002-04       Impact factor: 2.327

2.  There are two different species B adenovirus receptors: sBAR, common to species B1 and B2 adenoviruses, and sB2AR, exclusively used by species B2 adenoviruses.

Authors:  Anna Segerman; Niklas Arnberg; Anders Erikson; Kristina Lindman; Göran Wadell
Journal:  J Virol       Date:  2003-01       Impact factor: 5.103

3.  Rapid detection of adenovirus in throat swab specimens by PCR during respiratory disease outbreaks among military recruits.

Authors:  Marcela Echavarria; Jose L Sanchez; Shellie A Kolavic-Gray; Christina S Polyak; Felicia Mitchell-Raymundo; Bruce L Innis; David Vaughn; Richard Reynolds; Leonard N Binn
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

4.  Selection of nonfastidious adenovirus species in 293 cells inoculated with stool specimens containing adenovirus 40.

Authors:  M Brown
Journal:  J Clin Microbiol       Date:  1985-08       Impact factor: 5.948

5.  Characteristics of a human cell line transformed by DNA from human adenovirus type 5.

Authors:  F L Graham; J Smiley; W C Russell; R Nairn
Journal:  J Gen Virol       Date:  1977-07       Impact factor: 3.891

6.  Biochemical studies on adenovirus multiplication. XII. Plaquing efficiencies of purified human adenoviruses.

Authors:  M Green; M Piña; R C Kimes
Journal:  Virology       Date:  1967-03       Impact factor: 3.616

7.  Serotyping of adenoviruses on conjunctival scrapings by PCR and sequence analysis.

Authors:  S Takeuchi; N Itoh; E Uchio; K Aoki; S Ohno
Journal:  J Clin Microbiol       Date:  1999-06       Impact factor: 5.948

8.  Laboratory identification of adenoviruses associated with gastroenteritis in Canada from 1983 to 1986.

Authors:  M Brown
Journal:  J Clin Microbiol       Date:  1990-07       Impact factor: 5.948

Review 9.  Adenovirus: an increasingly important pathogen in paediatric bone marrow transplant patients.

Authors:  Tony Walls; A G Shankar; Delane Shingadia
Journal:  Lancet Infect Dis       Date:  2003-02       Impact factor: 25.071

10.  Intravenous Cidofovir therapy for disseminated adenovirus in a pediatric liver transplant recipient.

Authors:  Beth A Carter; Saul J Karpen; Ruben E Quiros-Tejeira; I-Fen Chang; Brenda S Clark; Gail J Demmler; Helen E Heslop; Jaymee D Scott; Philip Seu; John A Goss
Journal:  Transplantation       Date:  2002-10-15       Impact factor: 4.939

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  54 in total

1.  Phylogenetic analysis of the main neutralization and hemagglutination determinants of all human adenovirus prototypes as a basis for molecular classification and taxonomy.

Authors:  Ijad Madisch; Gabi Harste; Heidi Pommer; Albert Heim
Journal:  J Virol       Date:  2005-12       Impact factor: 5.103

2.  Rapid detection and molecular serotyping of adenovirus by use of PCR followed by electrospray ionization mass spectrometry.

Authors:  Lawrence B Blyn; Thomas A Hall; Brian Libby; Raymond Ranken; Rangarajan Sampath; Karl Rudnick; Emily Moradi; Anjali Desai; David Metzgar; Kevin L Russell; Nikki E Freed; Melinda Balansay; Michael P Broderick; Miguel A Osuna; Steven A Hofstadler; David J Ecker
Journal:  J Clin Microbiol       Date:  2007-12-19       Impact factor: 5.948

3.  First evidence of genotypes Ad3a16 and Ad3a18 in North America, obtained by genetic analysis of infectious human adenovirus from wastewaters of two urban communities in Canada.

Authors:  Sinisa Vidovic; Mahmoud Aly; Cecily Flemming; Susan Springthorpe; Syed A Sattar
Journal:  Appl Environ Microbiol       Date:  2011-04-22       Impact factor: 4.792

Review 4.  Adenovirus infections in immunocompetent and immunocompromised patients.

Authors:  Thomas Lion
Journal:  Clin Microbiol Rev       Date:  2014-07       Impact factor: 26.132

5.  Typing of human adenoviruses in specimens from immunosuppressed patients by PCR-fragment length analysis and real-time quantitative PCR.

Authors:  Karin Ebner; Margit Rauch; Sandra Preuner; Thomas Lion
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

Review 6.  Adenoviruses in immunocompromised hosts.

Authors:  Marcela Echavarría
Journal:  Clin Microbiol Rev       Date:  2008-10       Impact factor: 26.132

7.  Evaluation of multiplex type-specific real-time PCR assays using the LightCycler and joint biological agent identification and diagnostic system platforms for detection and quantitation of adult human respiratory adenoviruses.

Authors:  David Metzgar; Carl Gibbins; N Ryan Hudson; Morris S Jones
Journal:  J Clin Microbiol       Date:  2010-01-06       Impact factor: 5.948

8.  Simultaneous identification of 14 genital microorganisms in urine by use of a multiplex PCR-based reverse line blot assay.

Authors:  Michelle L McKechnie; Richard Hillman; Deborah Couldwell; Fanrong Kong; Eleanor Freedman; Hui Wang; Gwendolyn L Gilbert
Journal:  J Clin Microbiol       Date:  2009-04-08       Impact factor: 5.948

9.  Characterization of culture-positive adenovirus serotypes from respiratory specimens in Toronto, Ontario, Canada: September 2007-June 2008.

Authors:  Rani Yeung; AliReza Eshaghi; Ernesto Lombos; Joanne Blair; Tony Mazzulli; Laura Burton; Steven J Drews
Journal:  Virol J       Date:  2009-01-26       Impact factor: 4.099

10.  Human adenovirus 14a: a new epidemic threat.

Authors:  Gregory C Gray; Margaret L Chorazy
Journal:  J Infect Dis       Date:  2009-05-15       Impact factor: 5.226

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