Literature DB >> 15361415

Calculated coupling of transmembrane electron and proton transfer in dihemic quinol:fumarate reductase.

Alexander H Haas1, C Roy D Lancaster.   

Abstract

The quinol:fumarate reductase of Wolinella succinogenes binds a low- and a high-potential heme b group in its transmembrane subunit C. Both hemes are part of the electron transport chain between the two catalytic sites of this redox enzyme. The oxidation-reduction midpoint potentials of the hemes are well established but their assignment in the structure has not yet been determined. By simulating redox titrations, using continuum electrostatics calculations, it was possible to achieve an unequivocal assignment of the low- and high-potential hemes to the distal and proximal positions in the structure, respectively. Prominent features governing the differences in midpoint potential between the two hemes are the higher loss of reaction field energy for the proximal heme and the stronger destabilization of the oxidized form of the proximal heme due to several buried Arg and Lys residues. According to the so-called "E-pathway hypothesis", quinol:fumarate reductase has previously been postulated to exhibit a novel coupling of transmembrane electron and proton transfer. Simulation of heme b reduction indicates that the protonation state of the conserved residue Glu C180, predicted to play a key role in this process, indeed depends on the redox state of the hemes. This result clearly supports the E-pathway hypothesis.

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Year:  2004        PMID: 15361415      PMCID: PMC1304937          DOI: 10.1529/biophysj.104.042945

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  45 in total

1.  Respiration without O2.

Authors:  L Hederstedt
Journal:  Science       Date:  1999-06-18       Impact factor: 47.728

Review 2.  Succinate:quinone oxidoreductases: an overview.

Authors:  C Roy D Lancaster
Journal:  Biochim Biophys Acta       Date:  2002-01-17

Review 3.  The role of electrostatics in proton-conducting membrane protein complexes.

Authors:  C Roy D Lancaster
Journal:  FEBS Lett       Date:  2003-06-12       Impact factor: 4.124

4.  Energetics of electron-transfer and protonation reactions of the quinones in the photosynthetic reaction center of Rhodopseudomonas viridis.

Authors:  B Rabenstein; G M Ullmann; E W Knapp
Journal:  Biochemistry       Date:  1998-02-24       Impact factor: 3.162

5.  The coupling of electron transfer and proton translocation: electrostatic calculations on Paracoccus denitrificans cytochrome c oxidase.

Authors:  A Kannt; C R Lancaster; H Michel
Journal:  Biophys J       Date:  1998-02       Impact factor: 4.033

6.  A third crystal form of Wolinella succinogenes quinol:fumarate reductase reveals domain closure at the site of fumarate reduction.

Authors:  C R Lancaster; R Gross; J Simon
Journal:  Eur J Biochem       Date:  2001-03

7.  The dielectric constant of a folded protein.

Authors:  M K Gilson; B H Honig
Journal:  Biopolymers       Date:  1986-11       Impact factor: 2.505

8.  A theoretical model for the effects of local nonpolar heme environments on the redox potentials in cytochromes.

Authors:  R J Kassner
Journal:  J Am Chem Soc       Date:  1973-04-18       Impact factor: 15.419

9.  Conformational heterogeneity of the bacteriopheophytin electron acceptor HA in reaction centers from Rhodopseudomonas viridis revealed by Fourier transform infrared spectroscopy and site-directed mutagenesis.

Authors:  J Breton; M Bibikova; D Oesterhelt; E Nabedryk
Journal:  Biochemistry       Date:  1999-08-31       Impact factor: 3.162

10.  pH dependence of heme electrochemistry in cytochromes investigated by multiconformation continuum electrostatic calculations.

Authors:  K Hauser; J Mao; M R Gunner
Journal:  Biopolymers       Date:  2004 May-Jun 5       Impact factor: 2.505

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  17 in total

1.  Experimental support for the "E pathway hypothesis" of coupled transmembrane e- and H+ transfer in dihemic quinol:fumarate reductase.

Authors:  C Roy D Lancaster; Ursula S Sauer; Roland Gross; Alexander H Haas; Jürgen Graf; Harald Schwalbe; Werner Mäntele; Jörg Simon; M Gregor Madej
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-27       Impact factor: 11.205

2.  Evidence for transmembrane proton transfer in a dihaem-containing membrane protein complex.

Authors:  M Gregor Madej; Hamid R Nasiri; Nicole S Hilgendorff; Harald Schwalbe; C Roy D Lancaster
Journal:  EMBO J       Date:  2006-10-05       Impact factor: 11.598

3.  Multiconformation continuum electrostatics analysis of the NhaA Na+/H+ antiporter of Escherichia coli with functional implications.

Authors:  Elena Olkhova; Carola Hunte; Emanuela Screpanti; Etana Padan; Hartmut Michel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-13       Impact factor: 11.205

4.  Heterologous production in Wolinella succinogenes and characterization of the quinol:fumarate reductase enzymes from Helicobacter pylori and Campylobacter jejuni.

Authors:  Mauro Mileni; Fraser MacMillan; Christos Tziatzios; Klaus Zwicker; Alexander H Haas; Werner Mäntele; Jörg Simon; C Roy D Lancaster
Journal:  Biochem J       Date:  2006-04-01       Impact factor: 3.857

Review 5.  Catalytic mechanisms of complex II enzymes: a structural perspective.

Authors:  T M Iverson
Journal:  Biochim Biophys Acta       Date:  2012-09-18

6.  Calculated proton uptake on anaerobic reduction of cytochrome C oxidase: is the reaction electroneutral?

Authors:  Yifan Song; Ekaterina Michonova-Alexova; M R Gunner
Journal:  Biochemistry       Date:  2006-07-04       Impact factor: 3.162

7.  Electrostatic environment of hemes in proteins: pK(a)s of hydroxyl ligands.

Authors:  Yifan Song; Junjun Mao; M R Gunner
Journal:  Biochemistry       Date:  2006-07-04       Impact factor: 3.162

8.  Hydrogen-bonded networks along and bifurcation of the E-pathway in quinol:fumarate reductase.

Authors:  Elena Herzog; Wei Gu; Hanno D Juhnke; Alexander H Haas; Werner Mäntele; Jörg Simon; Volkhard Helms; C Roy D Lancaster
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

9.  MCCE2: improving protein pKa calculations with extensive side chain rotamer sampling.

Authors:  Yifan Song; Junjun Mao; M R Gunner
Journal:  J Comput Chem       Date:  2009-11-15       Impact factor: 3.376

10.  Protonation and hydrogen bonding of Ca2+ site residues in the E2P phosphoenzyme intermediate of sarcoplasmic reticulum Ca2+-ATPase studied by a combination of infrared spectroscopy and electrostatic calculations.

Authors:  Julia Andersson; Karin Hauser; Eeva-Liisa Karjalainen; Andreas Barth
Journal:  Biophys J       Date:  2007-09-21       Impact factor: 4.033

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