Literature DB >> 15361127

High-resolution typing of HLA-DRB1 locus in the Macedonian population.

A Petlichkovski1, O Efinska-Mladenovska, D Trajkov, T Arsov, A Strezova, M Spiroski.   

Abstract

The Macedonian population is of special interest for HLA anthropological study in the light of unanswered questions regarding its origin and relationship with other populations, especially the neighbouring Balkanians. Two studies have been performed to examine HLA molecular polymorphism in the Macedonian population, so far. The present study is the first to be performed in Macedonia using high-resolution sequence-based method for direct HLA typing. The study included 158 unrelated healthy volunteers of Macedonian origin and nationality, having a Christian Orthodox religion. After the simultaneous amplification of exon-2 on both HLA-DRB1 alleles, DNA sequencing was used for genotype assignment. In the 158 samples analysed, all 316 alleles were typed and a total of 29 different DRB1 alleles were detected, with DRB1*1601 being the most frequent allele (14.9%), followed by DRB1*1104 (13.9%). A phylogenetic tree constructed on the basis of the high-resolution data deriving from other populations revealed the clustering of Macedonians together with other Balkan populations (Greeks, Croats, Turks and Romanians) and Sardinians, close to another "European" cluster consisting of the Italian, French, Danish, Polish and Spanish populations. The included African populations grouped on the opposite side of the tree.

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Year:  2004        PMID: 15361127     DOI: 10.1111/j.1399-0039.2004.00273.x

Source DB:  PubMed          Journal:  Tissue Antigens        ISSN: 0001-2815


  6 in total

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Authors:  Steven J Mack; Bin Tu; Ruyan Yang; Carly Masaberg; Jennifer Ng; Carolyn Katovich Hurley
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2.  Balancing selection and heterogeneity across the classical human leukocyte antigen loci: a meta-analytic review of 497 population studies.

Authors:  Owen D Solberg; Steven J Mack; Alex K Lancaster; Richard M Single; Yingssu Tsai; Alicia Sanchez-Mazas; Glenys Thomson
Journal:  Hum Immunol       Date:  2008-06-09       Impact factor: 2.850

3.  The investigation of the origin of Southern Tunisians using HLA genes.

Authors:  Abdelhafidh Hajjej; Wassim Y Almawi; Lasmar Hattab; Amel El-Gaaied; Slama Hmida
Journal:  J Hum Genet       Date:  2016-11-24       Impact factor: 3.172

4.  HLA-A, -B, -C, and -DRB1 allele and haplotype frequencies distinguish Eastern European Americans from the general European American population.

Authors:  S J Mack; B Tu; A Lazaro; R Yang; A K Lancaster; K Cao; J Ng; C K Hurley
Journal:  Tissue Antigens       Date:  2008-10-24

5.  Genetics in Macedonia-Following the international trends.

Authors:  Elena Sukarova-Angelovska; Aleksandar Petlichkovski
Journal:  Mol Genet Genomic Med       Date:  2018-02-20       Impact factor: 2.473

6.  HLA-A, -B, -C, -DRB1, -DQA1, and -DQB1 allele and haplotype frequencies defined by next generation sequencing in a population of East Croatia blood donors.

Authors:  Stana Tokić; Veronika Žižkova; Mario Štefanić; Ljubica Glavaš-Obrovac; Saška Marczi; Marina Samardžija; Katerina Sikorova; Martin Petrek
Journal:  Sci Rep       Date:  2020-03-26       Impact factor: 4.379

  6 in total

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