Literature DB >> 15360853

A tool for abstracting relevant classes of concepts: the Common Ancestry Summarizer.

Ying Tao1, Eneida A Mendonça, Yves A Lussier.   

Abstract

Controlled Medical Terminologies (CMTs) are indispensable tools for present medical information systems and medical informatics researches. Concept-oriented architecture and multiple-hierarchy have been accepted as two of the desiderata of contemporary CMTs. A common problem for informaticians working with class-based methods for terminologies is to find the Most Relevant Common Ancestor (MRCA) for a group of concepts, the common ancestor which has the closest semantic distance to all the given concepts. Finding an ancestor concept to summarize a group of concepts is required to map concepts from the knowledgebase to those of appropriate granularity in CMTs. However, manually exploring the hierarchical relationships and determining the MRCA are daunting tasks due to the massive size, the multiple hierarchies and in some case the cycles of the hierarchical networks of terminologies. In our study, we developed a web-based visualization tool, the Common Ancestry Summarizer (CAS), that graphically displays the hierarchical relations of multiple concepts within CMTs, and also assist users to identify the MRCA of these concepts by identifying the Lowest Common Ancestors (LCAs). The CAS has been shown useful in organizing classes for the controlled terms used in clinical guidelines (e.g. "the bottom-up method").

Mesh:

Year:  2004        PMID: 15360853      PMCID: PMC2879046     

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  8 in total

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Authors:  O Bodenreider
Journal:  Proc AMIA Symp       Date:  2001

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Authors:  J J Cimino
Journal:  J Am Med Inform Assoc       Date:  2000 May-Jun       Impact factor: 4.497

Review 3.  Desiderata for controlled medical vocabularies in the twenty-first century.

Authors:  J J Cimino
Journal:  Methods Inf Med       Date:  1998-11       Impact factor: 2.176

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Authors:  K E Campbell; D E Oliver; E H Shortliffe
Journal:  J Am Med Inform Assoc       Date:  1998 Jan-Feb       Impact factor: 4.497

5.  SNOMED RT: a reference terminology for health care.

Authors:  K A Spackman; K E Campbell; R A Côté
Journal:  Proc AMIA Annu Fall Symp       Date:  1997

6.  Knowledge-based approaches to the maintenance of a large controlled medical terminology.

Authors:  J J Cimino; P D Clayton; G Hripcsak; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 Jan-Feb       Impact factor: 4.497

7.  The Unified Medical Language System.

Authors:  D A Lindberg; B L Humphreys; A T McCray
Journal:  Methods Inf Med       Date:  1993-08       Impact factor: 2.176

8.  A framework for comprehensive health terminology systems in the United States: development guidelines, criteria for selection, and public policy implications. ANSI Healthcare Informatics Standards Board Vocabulary Working Group and the Computer-Based Patient Records Institute Working Group on Codes and Structures.

Authors:  C G Chute; S P Cohn; J R Campbell
Journal:  J Am Med Inform Assoc       Date:  1998 Nov-Dec       Impact factor: 4.497

  8 in total
  1 in total

1.  Improving the human readability of Arden Syntax medical logic modules using a concept-oriented terminology and object-oriented programming expressions.

Authors:  Jeeyae Choi; Suzanne Bakken; Yves A Lussier; Eneida A Mendonça
Journal:  Comput Inform Nurs       Date:  2006 Jul-Aug       Impact factor: 1.985

  1 in total

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