Literature DB >> 15358579

The mammalian beta globin origin of DNA replication.

Mirit I Aladjem1.   

Abstract

Initiation of DNA replication is a tightly regulated process aimed to insure that the entire genome is replicated at the appropriate time during each cell cycle. In the human beta globin locus, replication initiates from a region between the two genes that encode the adult subunit of hemoglobin (the beta globin initiation region, or IR). Mammalian beta globin loci replicate early during the S phase of the cell cycle in pre erythroid cells, in which the beta-globin locus is present in a euchromatin form. However, in cells that do not express globin and in which the locus is heterochromatic, these same loci replicate during the later stages of S phase. Both early and late replication patterns utilize similar replication initiation regions. These features make the beta globin locus an attractive model for studying the determinants of replication sites and replication timing, as well as the correlation between gene expression and DNA replication. Two genomic domains are essential for initiation of DNA replication within the locus: the initiation region (IR), and a 40 kb region upstream of the globin gene cluster known as the locus control region (LCR). The IR meets the genetic requirements for a chromosomal replicator, since it can initiate DNA replication at ectopic sites. The LCR regulates transcriptional activity and chromatin structure, and may act as a determinant of replication timing. This review will summarize recent findings characterizing the sequence requirements for initiation of DNA replication in mammalian beta globin loci and will discuss the specific influence of the location and the chromosomal environment in regulating DNA replication at the beta globin IR.

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Year:  2004        PMID: 15358579     DOI: 10.2741/1415

Source DB:  PubMed          Journal:  Front Biosci        ISSN: 1093-4715


  8 in total

1.  Inhibition of histone deacetylase in cancer cells slows down replication forks, activates dormant origins, and induces DNA damage.

Authors:  Chiara Conti; Elisabetta Leo; Gabriel S Eichler; Olivier Sordet; Melvenia M Martin; Angela Fan; Mirit I Aladjem; Yves Pommier
Journal:  Cancer Res       Date:  2010-05-11       Impact factor: 12.701

2.  A multiprotein complex necessary for both transcription and DNA replication at the β-globin locus.

Authors:  Subhradip Karmakar; Milind C Mahajan; Vincent Schulz; Gokul Boyapaty; Sherman M Weissman
Journal:  EMBO J       Date:  2010-08-31       Impact factor: 11.598

3.  Kaposi's Sarcoma-Associated Herpesvirus Genome Replication, Partitioning, and Maintenance in Latency.

Authors:  Eriko Ohsaki; Keiji Ueda
Journal:  Front Microbiol       Date:  2012-01-24       Impact factor: 5.640

4.  Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins.

Authors:  Larry D Mesner; Veena Valsakumar; Marcin Cieslik; Rebecca Pickin; Joyce L Hamlin; Stefan Bekiranov
Journal:  Genome Res       Date:  2013-07-16       Impact factor: 9.043

5.  A Role of hIPI3 in DNA Replication Licensing in Human Cells.

Authors:  Yining Huang; Aftab Amin; Yan Qin; Ziyi Wang; Huadong Jiang; Lu Liang; Linjing Shi; Chun Liang
Journal:  PLoS One       Date:  2016-04-08       Impact factor: 3.240

6.  The β-globin Replicator greatly enhances the potential of S/MAR based episomal vectors for gene transfer into human haematopoietic progenitor cells.

Authors:  Eleana F Stavrou; Vassileios M Lazaris; Aristeidis Giannakopoulos; Eirini Papapetrou; Alexandros Spyridonidis; Nikolas C Zoumbos; Antonis Gkountis; Aglaia Athanassiadou
Journal:  Sci Rep       Date:  2017-01-20       Impact factor: 4.379

7.  Differences in firing efficiency, chromatin, and transcription underlie the developmental plasticity of the Arabidopsis DNA replication origins.

Authors:  Joana Sequeira-Mendes; Zaida Vergara; Ramon Peiró; Jordi Morata; Irene Aragüez; Celina Costas; Raul Mendez-Giraldez; Josep M Casacuberta; Ugo Bastolla; Crisanto Gutierrez
Journal:  Genome Res       Date:  2019-03-07       Impact factor: 9.043

8.  Episomal vectors based on S/MAR and the β-globin Replicator, encoding a synthetic transcriptional activator, mediate efficient γ-globin activation in haematopoietic cells.

Authors:  Eleana F Stavrou; Emannuouil Simantirakis; Meletios Verras; Carlos Barbas; George Vassilopoulos; Kenneth R Peterson; Aglaia Athanassiadou
Journal:  Sci Rep       Date:  2019-12-24       Impact factor: 4.379

  8 in total

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