Literature DB >> 15351144

Coevolving solutions to the shortest common superstring problem.

Assaf Zaritsky1, Moshe Sipper.   

Abstract

The shortest common superstring (SCS) problem, known to be NP-Complete, seeks the shortest string that contains all strings from a given set. In this paper we compare four approaches for finding solutions to the SCS problem: a standard genetic algorithm, a novel cooperative-coevolutionary algorithm, a benchmark greedy algorithm, and a parallel coevolutionary-greedy approach. We show the coevolutionary approach produces the best results, and discuss directions for future research.

Mesh:

Year:  2004        PMID: 15351144     DOI: 10.1016/j.biosystems.2004.05.013

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  2 in total

1.  To know the objective is not (necessarily) to know the objective function.

Authors:  Moshe Sipper; Ryan J Urbanowicz; Jason H Moore
Journal:  BioData Min       Date:  2018-10-04       Impact factor: 2.522

2.  A probabilistic coevolutionary biclustering algorithm for discovering coherent patterns in gene expression dataset.

Authors:  Je-Gun Joung; Soo-Jin Kim; Soo-Yong Shin; Byoung-Tak Zhang
Journal:  BMC Bioinformatics       Date:  2012-12-13       Impact factor: 3.169

  2 in total

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