Literature DB >> 15349945

Determination of SARS-coronavirus by a microfluidic chip system.

Xiaomian Zhou1, Dayu Liu, Runtao Zhong, Zhongpeng Dai, Dapeng Wu, Hui Wang, Yuguang Du, Zhinan Xia, Liping Zhang, Xiaodai Mei, Bingcheng Lin.   

Abstract

We have developed a new experimental system based on a microfluidic chip to determine severe acute respiratory syndrome coronavirus (SARS-CoV). The system includes a laser-induced fluorescence microfluidic chip analyzer, a glass microchip for both polymerase chain reaction (PCR) and capillary electrophoresis, a chip thermal cycler based on dual Peltier thermoelectric elements, a reverse transcription-polymerase chain reaction (RT-PCR) SARS diagnostic kit, and a DNA electrophoretic sizing kit. The system allows efficient cDNA amplification of SARS-CoV followed by electrophoretic sizing and detection on the same chip. To enhance the reliability of RT-PCR on SARS-CoV detection, duplex PCR was developed on the microchip. The assay was carried out on a home-made microfluidic chip system. The positive and the negative control were cDNA fragments of SARS-CoV and parainfluenza virus, respectively. The test results showed that 17 positive samples were obtained among 18 samples of nasopharyngeal swabs from clinically diagnosed SARS patients. However, 12 positive results from the same 18 samples were obtained by the conventional RT-PCR with agarose gel electrophoresis detection. The SARS virus species can be analyzed with high positive rate and rapidity on the microfluidic chip system.

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Year:  2004        PMID: 15349945      PMCID: PMC7163670          DOI: 10.1002/elps.200305966

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  15 in total

1.  PCR detection of bacteria in seven minutes.

Authors:  P Belgrader; W Benett; D Hadley; J Richards; P Stratton; R Mariella; F Milanovich
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2.  Integrated system for rapid PCR-based DNA analysis in microfluidic devices.

Authors:  J Khandurina; T E McKnight; S C Jacobson; L C Waters; R S Foote; J M Ramsey
Journal:  Anal Chem       Date:  2000-07-01       Impact factor: 6.986

3.  Rapid pathogen detection using a microchip PCR array instrument.

Authors:  P Belgrader; W Benett; D Hadley; G Long; R Mariella; F Milanovich; S Nasarabadi; W Nelson; J Richards; P Stratton
Journal:  Clin Chem       Date:  1998-10       Impact factor: 8.327

4.  Integrated capillary electrophoresis on flexible silicone microdevices:  analysis of DNA restriction fragments and detection of single DNA molecules on microchips.

Authors:  C S Effenhauser; G J Bruin; A Paulus; M Ehrat
Journal:  Anal Chem       Date:  1997-09-01       Impact factor: 6.986

5.  Chemical amplification: continuous-flow PCR on a chip.

Authors:  M U Kopp; A J Mello; A Manz
Journal:  Science       Date:  1998-05-15       Impact factor: 47.728

6.  Real-time microchip PCR for detecting single-base differences in viral and human DNA.

Authors:  M S Ibrahim; R S Lofts; P B Jahrling; E A Henchal; V W Weedn; M A Northrup; P Belgrader
Journal:  Anal Chem       Date:  1998-05-01       Impact factor: 6.986

7.  Suitability and clinical application of a multiplex nested PCR assay for the diagnosis of herpes simplex virus infections.

Authors:  P Cassinotti; H Mietz; G Siegl
Journal:  J Med Virol       Date:  1996-09       Impact factor: 2.327

8.  Rapid detection of different RNA respiratory virus species by multiplex RT-PCR: application to clinical specimens.

Authors:  M Valassina; A M Cuppone; M G Cusi; P E Valensin
Journal:  Clin Diagn Virol       Date:  1997-11

9.  The SARS coronavirus: rapid diagnostics in the limelight.

Authors:  Kenneth McIntosh
Journal:  Clin Chem       Date:  2003-06       Impact factor: 8.327

10.  Rapid diagnosis of a coronavirus associated with severe acute respiratory syndrome (SARS).

Authors:  Leo L M Poon; On Kei Wong; Kwok Hung Chan; Winsie Luk; Kwok Yung Yuen; Joseph S M Peiris; Yi Guan
Journal:  Clin Chem       Date:  2003-06       Impact factor: 8.327

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  20 in total

Review 1.  Sample pretreatment and nucleic acid-based detection for fast diagnosis utilizing microfluidic systems.

Authors:  Jung-Hao Wang; Chih-Hung Wang; Gwo-Bin Lee
Journal:  Ann Biomed Eng       Date:  2011-12-07       Impact factor: 3.934

2.  A microfluidic DNA computing processor for gene expression analysis and gene drug synthesis.

Authors:  Yu Zhang; Hao Yu; Jianhua Qin; Bingcheng Lin
Journal:  Biomicrofluidics       Date:  2009-11-06       Impact factor: 2.800

3.  Integrated capillary electrophoresis microsystem for multiplex analysis of human respiratory viruses.

Authors:  Numrin Thaitrong; Peng Liu; Thomas Briese; W Ian Lipkin; Thomas N Chiesl; Yukiko Higa; Richard A Mathies
Journal:  Anal Chem       Date:  2010-11-29       Impact factor: 6.986

Review 4.  Point-of-care diagnostics for infectious diseases: From methods to devices.

Authors:  Chao Wang; Mei Liu; Zhifei Wang; Song Li; Yan Deng; Nongyue He
Journal:  Nano Today       Date:  2021-02-06       Impact factor: 20.722

5.  Quantification of biogenic amines by microchip electrophoresis with chemiluminescence detection.

Authors:  Shulin Zhao; Yong Huang; Ming Shi; Yi-Ming Liu
Journal:  J Chromatogr A       Date:  2009-05-03       Impact factor: 4.759

6.  Quantification of carnosine-related peptides by microchip electrophoresis with chemiluminescence detection.

Authors:  Shulin Zhao; Yong Huang; Ming Shi; Junming Huang; Yi-Ming Liu
Journal:  Anal Biochem       Date:  2009-06-16       Impact factor: 3.365

Review 7.  Sample preparation: the weak link in microfluidics-based biodetection.

Authors:  Raymond Mariella
Journal:  Biomed Microdevices       Date:  2008-12       Impact factor: 2.838

Review 8.  Miniaturized detection technology in molecular diagnostics.

Authors:  Larry J Kricka; Jason Y Park; Sam F Y Li; Paolo Fortina
Journal:  Expert Rev Mol Diagn       Date:  2005-07       Impact factor: 5.225

9.  A Low-Cost Palmtop High-Speed Capillary Electrophoresis Bioanalyzer with Laser Induced Fluorescence Detection.

Authors:  Jian-Zhang Pan; Pan Fang; Xiao-Xia Fang; Ting-Ting Hu; Jin Fang; Qun Fang
Journal:  Sci Rep       Date:  2018-01-29       Impact factor: 4.379

10.  Study of interactions between actinomycin D and oligonucleotides by microchip electrophoresis and ESI-MS.

Authors:  Xiaomian Zhou; Zheng Shen; Dazhi Li; Xinya He; Bingcheng Lin
Journal:  Talanta       Date:  2006-12-21       Impact factor: 6.057

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