Literature DB >> 15345539

Simulating induced interdigitation in membranes.

Marieke Kranenburg1, Martin Vlaar, Berend Smit.   

Abstract

In this study we introduce a mesoscopic lipid-water-alcohol model. Dissipative particle dynamics (DPD) simulations have been used to investigate the induced interdigitation of bilayers consisting of double-tail lipids by adding alcohol molecules to the bilayer. Our simulations nicely reproduce the experimental phase diagrams. We find that alcohol can induce an interdigitated structure where the common bilayer structure changes into monolayer in which the alcohol molecules screen the hydrophobic tails from the water phase. At low concentrations of alcohol the membrane has domains of the interdigitated phase that are in coexistence with the common membrane phase. We compute the effect of the chain length of the alcohol on the phase behavior of the membrane and show that the stability of the interdigitated phase depends on the length of the alcohol. We show that we can reproduce the experimental hydrophobic thickness of the bilayer for various combinations of lipids and alcohols. We use our model to clarify some of the experimental questions related to the structure of the interdigitated phase and put forward a simple model that explains the alcohol chain length dependence of the stability of this interdigitated phase.

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Year:  2004        PMID: 15345539      PMCID: PMC1304565          DOI: 10.1529/biophysj.104.045005

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  35 in total

1.  A thermodynamic study of the partition of n-hexane into phosphatidylcholine and phosphatidylcholine-cholesterol bilayers.

Authors:  S A Simon; W L Stone; P Busto-Latorre
Journal:  Biochim Biophys Acta       Date:  1977-08-01

2.  Studies of the structure and organization of cationic lipid bilayer membranes: calorimetric, spectroscopic, and x-ray diffraction studies of linear saturated P-O-ethyl phosphatidylcholines.

Authors:  R N Lewis; I Winter; M Kriechbaum; K Lohner; R N McElhaney
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

3.  Molecular simulations of mesoscopic bilayer phases.

Authors:  Marieke Kranenburg; Maddalena Venturoli; Berend Smit
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-06-18

4.  Effects of alcohols on lipid bilayers with and without cholesterol: the dipalmitoylphosphatidylcholine system.

Authors:  M F Rosser; H M Lu; P Dea
Journal:  Biophys Chem       Date:  1999-09-13       Impact factor: 2.352

5.  Nuclear Overhauser enhancement spectroscopy cross-relaxation rates and ethanol distribution across membranes.

Authors:  Scott E Feller; Christopher A Brown; David T Nizza; Klaus Gawrisch
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

6.  Studies of the ethanol-induced interdigitated gel phase in phosphatidylcholines using the fluorophore 1,6-diphenyl-1,3,5-hexatriene.

Authors:  P Nambi; E S Rowe; T J McIntosh
Journal:  Biochemistry       Date:  1988-12-27       Impact factor: 3.162

7.  Effect of n-alcohols and glycerol on the pretransition of dipalmitoylphosphatidylcholine.

Authors:  J A Veiro; P Nambi; L L Herold; E S Rowe
Journal:  Biochim Biophys Acta       Date:  1987-06-30

8.  Structure of gel phase DMPC determined by X-ray diffraction.

Authors:  Stephanie Tristram-Nagle; Yufeng Liu; Justin Legleiter; John F Nagle
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

9.  Effects of short-chain alcohols on the phase behavior and interdigitation of phosphatidylcholine bilayer membranes.

Authors:  L Löbbecke; G Cevc
Journal:  Biochim Biophys Acta       Date:  1995-07-06

10.  Interdigitated structure of phospholipid-alcohol systems studied by x-ray diffraction.

Authors:  T Adachi; H Takahashi; K Ohki; I Hatta
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

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  20 in total

1.  Cluster formation of anchored proteins induced by membrane-mediated interaction.

Authors:  Shuangyang Li; Xianren Zhang; Wenchuan Wang
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

2.  Effect of the cosolutes trehalose and methanol on the equilibrium and phase-transition properties of glycerol-monopalmitate lipid bilayers investigated using molecular dynamics simulations.

Authors:  Monika Laner; Bruno A C Horta; Philippe H Hünenberger
Journal:  Eur Biophys J       Date:  2014-08-24       Impact factor: 1.733

3.  How alcohol chain-length and concentration modulate hydrogen bond formation in a lipid bilayer.

Authors:  Allison N Dickey; Roland Faller
Journal:  Biophys J       Date:  2007-01-11       Impact factor: 4.033

Review 4.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

5.  Interdigitation of Lipids Induced by Membrane-Active Proteins.

Authors:  T Devanand; Sankaran Krishnaswamy; Satyavani Vemparala
Journal:  J Membr Biol       Date:  2019-06-11       Impact factor: 1.843

6.  Simulation studies of protein-induced bilayer deformations, and lipid-induced protein tilting, on a mesoscopic model for lipid bilayers with embedded proteins.

Authors:  Maddalena Venturoli; Berend Smit; Maria Maddalena Sperotto
Journal:  Biophys J       Date:  2005-03       Impact factor: 4.033

7.  Alcohols reduce lateral membrane pressures: predictions from molecular theory.

Authors:  Amalie L Frischknecht; Laura J Douglas Frink
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

8.  Amphotericin B induces interdigitation of apolipoprotein stabilized nanodisk bilayers.

Authors:  Thanh-Son Nguyen; Paul M M Weers; Vincent Raussens; Zhen Wang; Gang Ren; Todd Sulchek; Paul D Hoeprich; Robert O Ryan
Journal:  Biochim Biophys Acta       Date:  2007-10-16

9.  Simulations of Biomembranes and Water: Important Technical Aspects.

Authors:  Sandra V Bennun; Allison N Dickey; Chenyue Xing; Roland Faller
Journal:  Fluid Phase Equilib       Date:  2007-12-01       Impact factor: 2.775

10.  The influence of 1-alkanols and external pressure on the lateral pressure profiles of lipid bilayers.

Authors:  Beate Griepernau; Rainer A Böckmann
Journal:  Biophys J       Date:  2008-10-10       Impact factor: 4.033

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