Literature DB >> 15342254

Solid-state 31P NMR spectroscopy of microcrystals of the Ras protein and its effector loop mutants: comparison between crystalline and solution state.

Adriana Iuga1, Michael Spoerner, Hans Robert Kalbitzer, Eike Brunner.   

Abstract

Cycling between a GTP bound "on" state and a GDP bound "off" state, guanine nucleotide-binding (GNB) proteins act as molecular switches. The switching process and the interaction with effectors, GTPase-activating proteins, and guanosine nucleotide-exchange factors is accompanied by pronounced conformational changes of the switch regions of the GNB proteins. The aim of the present contribution is to correlate conformational changes observed by liquid-state NMR with solid-state (31)P NMR data and with the results of X-ray crystallography. Crystalline wild-type Ras complexed with GTP analogs such as GppCH(2)p and GppNHp could be prepared. At low temperatures, two different signals were found for the gamma-phosphate group of GppNHp bound to wild-type Ras. This behavior indicates the existence of two different conformations of the molecule in the crystalline state as it is found in solution but not by X-ray crystallography. In contrast to the GppNHp complex, the two separate gamma-phosphate signals could not be observed for GppCH(2)p bound to wild-type Ras. However, an increasing linewidth at low temperature indicates the presence of an exchange process. The results obtained for the wild-type protein are compared with the behavior of GppNHp complexes of the effector loop mutants Ras(T35S) and Ras(T35A). These mutants prefer a conformation similar to the GDP bound "off" state.

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Year:  2004        PMID: 15342254     DOI: 10.1016/j.jmb.2004.07.077

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  4 in total

1.  Mapping of protein structural ensembles by chemical shifts.

Authors:  Kumaran Baskaran; Konrad Brunner; Claudia E Munte; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2010-08-01       Impact factor: 2.835

Review 2.  Lessons from computer simulations of Ras proteins in solution and in membrane.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  Biochim Biophys Acta       Date:  2013-07-30

3.  Conformational states of human rat sarcoma (Ras) protein complexed with its natural ligand GTP and their role for effector interaction and GTP hydrolysis.

Authors:  Michael Spoerner; Constantin Hozsa; Johann A Poetzl; Kerstin Reiss; Petra Ganser; Matthias Geyer; Hans Robert Kalbitzer
Journal:  J Biol Chem       Date:  2010-10-11       Impact factor: 5.157

4.  The protonation states of GTP and GppNHp in Ras proteins.

Authors:  Daniel Mann; Jörn Güldenhaupt; Jonas Schartner; Klaus Gerwert; Carsten Kötting
Journal:  J Biol Chem       Date:  2018-01-30       Impact factor: 5.157

  4 in total

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