Literature DB >> 15342241

The crystal structure of mouse phosphoglucose isomerase at 1.6A resolution and its complex with glucose 6-phosphate reveals the catalytic mechanism of sugar ring opening.

J T Graham Solomons1, Ella M Zimmerly, Suzanne Burns, N Krishnamurthy, Michael K Swan, Sandra Krings, Hilary Muirhead, John Chirgwin, Christopher Davies.   

Abstract

Phosphoglucose isomerase (PGI) is an enzyme of glycolysis that interconverts glucose 6-phosphate (G6P) and fructose 6-phosphate (F6P) but, outside the cell, is a multifunctional cytokine. High-resolution crystal structures of the enzyme from mouse have been determined in native form and in complex with the inhibitor erythrose 4-phosphate, and with the substrate glucose 6-phosphate. In the substrate-bound structure, the glucose sugar is observed in both straight-chain and ring forms. This structure supports a specific role for Lys518 in enzyme-catalyzed ring opening and we present a "push-pull" mechanism in which His388 breaks the O5-C1 bond by donating a proton to the ring oxygen atom and, simultaneously, Lys518 abstracts a proton from the C1 hydroxyl group. The reverse occurs in ring closure. The transition from ring form to straight-chain substrate is achieved through rotation of the C3-C4 bond, which brings the C1-C2 region into close proximity to Glu357, the base catalyst for the isomerization step. The structure with G6P also explains the specificity of PGI for glucose 6-phosphate over mannose 6-isomerase (M6P). To isomerize M6P to F6P requires a rotation of its C2-C3 bond but in PGI this is sterically blocked by Gln511.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15342241     DOI: 10.1016/j.jmb.2004.07.085

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  19 in total

1.  Crystallization and preliminary X-ray characterization of phosphoglucose isomerase from Mycobacterium tuberculosis H37Rv.

Authors:  Divya Mathur; Kanchan Anand; Deepika Mathur; Nirmala Jagadish; Anil Suri; Lalit C Garg
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-03-30

2.  Structural studies of phosphoglucose isomerase from Mycobacterium tuberculosis H37Rv.

Authors:  Kanchan Anand; Divya Mathur; Avishek Anant; Lalit C Garg
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

3.  Crystallization and preliminary X-ray crystallographic study of phosphoglucose isomerase from Plasmodium falciparum.

Authors:  Ken-ichi Aoki; Nobutada Tanaka; Yoshio Kusakabe; Chiharu Fukumi; Arayo Haga; Masayuki Nakanishi; Yukio Kitade; Kazuo T Nakamura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-25

Review 4.  Anticancer agents that counteract tumor glycolysis.

Authors:  Carlotta Granchi; Filippo Minutolo
Journal:  ChemMedChem       Date:  2012-06-08       Impact factor: 3.466

5.  Electrostatic fingerprints of catalytically active amino acids in enzymes.

Authors:  Suhasini M Iyengar; Kelly K Barnsley; Rholee Xu; Aleksandr Prystupa; Mary Jo Ondrechen
Journal:  Protein Sci       Date:  2022-05       Impact factor: 6.725

6.  Crystallization and preliminary crystallographic study of the phosphoglucose isomerase from Bacillus subtilis.

Authors:  Yian Liang Lee; TienHsiung Thomas Li
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-11-28

7.  Structural insights into the epimerization of β-1,4-linked oligosaccharides catalyzed by cellobiose 2-epimerase, the sole enzyme epimerizing non-anomeric hydroxyl groups of unmodified sugars.

Authors:  Takaaki Fujiwara; Wataru Saburi; Hirokazu Matsui; Haruhide Mori; Min Yao
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

8.  Emergence of complex haplotypes from microevolutionary variation in sequence and structure of Colias phosphoglucose isomerase.

Authors:  Baiqing Wang; Ward B Watt; Christopher Aakre; Noah Hawthorne
Journal:  J Mol Evol       Date:  2009-05-08       Impact factor: 2.395

9.  Probing the molecular determinant for the catalytic efficiency of L-arabinose isomerase from Bacillus licheniformis.

Authors:  Ponnandy Prabhu; Marimuthu Jeya; Jung-Kul Lee
Journal:  Appl Environ Microbiol       Date:  2010-01-04       Impact factor: 4.792

10.  Insufficient autoantigen presentation and failure of tolerance in a mouse model of rheumatoid arthritis.

Authors:  Jason Perera; Xiao Liu; Yuzhen Zhou; Nora E Joseph; Liping Meng; Jerrold R Turner; Haochu Huang
Journal:  Arthritis Rheum       Date:  2013-11
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.