Literature DB >> 15341727

Novel catalytic mechanism of glycoside hydrolysis based on the structure of an NAD+/Mn2+ -dependent phospho-alpha-glucosidase from Bacillus subtilis.

Shyamala S Rajan1, Xiaojing Yang, Frank Collart, Vivian L Y Yip, Stephen G Withers, Annabelle Varrot, John Thompson, Gideon J Davies, Wayne F Anderson.   

Abstract

GlvA, a 6-phospho-alpha-glucosidase from Bacillus subtilis, catalyzes the hydrolysis of maltose-6'-phosphate and belongs to glycoside hydrolase family GH4. GH4 enzymes are unique in their requirement for NAD(H) and a divalent metal for activity. We have determined the crystal structure of GlvA in complex with its ligands to 2.05 A resolution. Analyses of the active site architecture, in conjunction with mechanistic studies and precedent from the nucleotide diphosphate hexose dehydratases and other systems, suggest a novel mechanism of glycoside hydrolysis by GlvA that involves both the NAD(H) and the metal.

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Year:  2004        PMID: 15341727     DOI: 10.1016/j.str.2004.06.020

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  19 in total

1.  α-Galacturonidase(s): a new class of Family 4 glycoside hydrolases with strict specificity and a unique CHEV active site motif.

Authors:  John Thompson; Andreas Pikis; Jamie Rich; Barry G Hall; Stephen G Withers
Journal:  FEBS Lett       Date:  2013-02-14       Impact factor: 4.124

2.  Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61.

Authors:  James A Langston; Tarana Shaghasi; Eric Abbate; Feng Xu; Elena Vlasenko; Matt D Sweeney
Journal:  Appl Environ Microbiol       Date:  2011-08-05       Impact factor: 4.792

3.  Metabolism of sugars by genetically diverse species of oral Leptotrichia.

Authors:  J Thompson; A Pikis
Journal:  Mol Oral Microbiol       Date:  2011-10-04       Impact factor: 3.563

4.  Structural insight into the catalytic mechanism of gluconate 5-dehydrogenase from Streptococcus suis: Crystal structures of the substrate-free and quaternary complex enzymes.

Authors:  Qiangmin Zhang; Hao Peng; Feng Gao; Yiwei Liu; Hao Cheng; John Thompson; George F Gao
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

5.  Enterococcus faecalis utilizes maltose by connecting two incompatible metabolic routes via a novel maltose 6'-phosphate phosphatase (MapP).

Authors:  Abdelhamid Mokhtari; Víctor S Blancato; Guillermo D Repizo; Céline Henry; Andreas Pikis; Alexa Bourand; María de Fátima Álvarez; Stefan Immel; Aicha Mechakra-Maza; Axel Hartke; John Thompson; Christian Magni; Josef Deutscher
Journal:  Mol Microbiol       Date:  2013-03-14       Impact factor: 3.501

6.  Evolution and biochemistry of family 4 glycosidases: implications for assigning enzyme function in sequence annotations.

Authors:  Barry G Hall; Andreas Pikis; John Thompson
Journal:  Mol Biol Evol       Date:  2009-07-22       Impact factor: 16.240

7.  Characterization of a novel metagenome-derived 6-phospho-β-glucosidase from black liquor sediment.

Authors:  Chunyu Yang; Yu Niu; Chunfang Li; Deyu Zhu; Wei Wang; Xinqiang Liu; Bin Cheng; Cuiqing Ma; Ping Xu
Journal:  Appl Environ Microbiol       Date:  2013-01-18       Impact factor: 4.792

8.  Enzymatic analysis of uridine diphosphate N-acetyl-D-glucosamine.

Authors:  Seema C Namboori; David E Graham
Journal:  Anal Biochem       Date:  2008-06-27       Impact factor: 3.365

9.  Identification of a GH110 subfamily of alpha 1,3-galactosidases: novel enzymes for removal of the alpha 3Gal xenotransplantation antigen.

Authors:  Qiyong P Liu; Huaiping Yuan; Eric P Bennett; Steven B Levery; Edward Nudelman; Jean Spence; Greg Pietz; Kristen Saunders; Thayer White; Martin L Olsson; Bernard Henrissat; Gerlind Sulzenbacher; Henrik Clausen
Journal:  J Biol Chem       Date:  2008-01-28       Impact factor: 5.157

10.  The sim operon facilitates the transport and metabolism of sucrose isomers in Lactobacillus casei ATCC 334.

Authors:  John Thompson; Nicholas Jakubovics; Bindu Abraham; Sonja Hess; Andreas Pikis
Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

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