Literature DB >> 15339805

Structure and transport mechanism of the bacterial oxalate transporter OxlT.

Teruhisa Hirai1, Sriram Subramaniam.   

Abstract

Membrane proteins that belong to the major facilitator superfamily (MFS) are found in organisms across the evolutionary spectrum and mediate the transport of a variety of substrates ranging from small metabolites to neurotransmitters. The oxalate transporter (OxlT) is a representative MFS protein, and exchanges formate for oxalate across the cytoplasmic membrane of the organism Oxalobacter formigenes. Here, we present a structural model for the protein conformational changes that occur during oxalate transport by combining a three-dimensional map of the oxalate-bound, "closed" state of OxlT at 6.5 A determined by cryo-electron microscopy with a model of the "open" state of OxlT based on the atomic structures of the related transporters, glycerol-3-phosphate transporter (GlpT) and lactose permease (LacY). We demonstrate that the principal structural change associated with substrate transport is a concerted rocking movement of the two structurally similar halves of the protein relative to each other. Our structural model places two positively charged residues, Arg-272 and Lys-355 in the central cavity, suggesting that electrostatic interactions between these residues and the oxalate anion is a key step in generating the conformational change between the open and closed states of the transporter.

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Year:  2004        PMID: 15339805      PMCID: PMC1304825          DOI: 10.1529/biophysj.104.049320

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Microbial genome analyses: comparative transport capabilities in eighteen prokaryotes.

Authors:  I T Paulsen; L Nguyen; M K Sliwinski; R Rabus; M H Saier
Journal:  J Mol Biol       Date:  2000-08-04       Impact factor: 5.469

2.  Projection structure and molecular architecture of OxlT, a bacterial membrane transporter.

Authors:  J A Heymann; R Sarker; T Hirai; D Shi; J L Milne; P C Maloney; S Subramaniam
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

3.  Structural model for 12-helix transporters belonging to the major facilitator superfamily.

Authors:  Teruhisa Hirai; Jürgen A W Heymann; Peter C Maloney; Sriram Subramaniam
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

4.  Sequence similarity between the channel-forming domains of voltage-gated ion channel proteins and the C-terminal domains of secondary carriers of the major facilitator superfamily.

Authors:  Rikki N Hvorup; Milton H Saier
Journal:  Microbiology       Date:  2002-12       Impact factor: 2.777

5.  Complete cysteine-scanning mutagenesis and site-directed chemical modification of the Tn10-encoded metal-tetracycline/H+ antiporter.

Authors:  N Tamura; S Konishi; S Iwaki; T Kimura-Someya; S Nada; A Yamaguchi
Journal:  J Biol Chem       Date:  2001-02-06       Impact factor: 5.157

6.  Three-dimensional structure of a bacterial oxalate transporter.

Authors:  Teruhisa Hirai; Jürgen A W Heymann; Dan Shi; Rafiquel Sarker; Peter C Maloney; Sriram Subramaniam
Journal:  Nat Struct Biol       Date:  2002-08

7.  Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli.

Authors:  Yafei Huang; M Joanne Lemieux; Jinmei Song; Manfred Auer; Da-Neng Wang
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

8.  Structure and mechanism of the lactose permease of Escherichia coli.

Authors:  Jeff Abramson; Irina Smirnova; Vladimir Kasho; Gillian Verner; H Ronald Kaback; So Iwata
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

9.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

10.  Structure/function relationships in OxlT, the oxalate-formate transporter of oxalobacter formigenes. Assignment of transmembrane helix 11 to the translocation pathway.

Authors:  D Fu; R I Sarker; K Abe; E Bolton; P C Maloney
Journal:  J Biol Chem       Date:  2000-12-11       Impact factor: 5.157

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  18 in total

Review 1.  Ins and outs of major facilitator superfamily antiporters.

Authors:  Christopher J Law; Peter C Maloney; Da-Neng Wang
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

2.  Changes in secondary structures and acidic side chains of melibiose permease upon cosubstrates binding.

Authors:  Xavier León; Raymonde Lemonnier; Gérard Leblanc; Esteve Padrós
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

3.  Conformational Propensities of Peptides Mimicking Transmembrane Helix 5 and Motif C in Wild-type and Mutant Vesicular Acetylcholine Transporters.

Authors:  Jia Luo; Stanley M Parsons
Journal:  ACS Chem Neurosci       Date:  2010-05-19       Impact factor: 4.418

4.  Experimental tests of a homology model for OxlT, the oxalate transporter of Oxalobacter formigenes.

Authors:  Qiang Yang; Xicheng Wang; Liwen Ye; Mark Mentrikoski; Elham Mohammadi; Young-Mog Kim; Peter C Maloney
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-02       Impact factor: 11.205

5.  Protonation drives the conformational switch in the multidrug transporter LmrP.

Authors:  Matthieu Masureel; Chloé Martens; Richard A Stein; Smriti Mishra; Jean-Marie Ruysschaert; Hassane S Mchaourab; Cédric Govaerts
Journal:  Nat Chem Biol       Date:  2013-12-08       Impact factor: 15.040

Review 6.  Structural perspectives on secondary active transporters.

Authors:  Olga Boudker; Grégory Verdon
Journal:  Trends Pharmacol Sci       Date:  2010-07-23       Impact factor: 14.819

7.  Structural requirements for the activity of the MirB ferrisiderophore transporter of Aspergillus fumigatus.

Authors:  Isabelle Raymond-Bouchard; Cassandra S Carroll; Jason R Nesbitt; Kevin A Henry; Linda J Pinto; Mina Moinzadeh; Jamie K Scott; Margo M Moore
Journal:  Eukaryot Cell       Date:  2012-08-17

8.  Capturing Functional Motions of Membrane Channels and Transporters with Molecular Dynamics Simulation.

Authors:  Saher Shaikh; Po-Chao Wen; Giray Enkavi; Zhijian Huang; Emad Tajkhorshid
Journal:  J Comput Theor Nanosci       Date:  2010-12

Review 9.  Diversity and ecology of oxalotrophic bacteria.

Authors:  Vincent Hervé; Thomas Junier; Saskia Bindschedler; Eric Verrecchia; Pilar Junier
Journal:  World J Microbiol Biotechnol       Date:  2016-01-09       Impact factor: 3.312

Review 10.  Vitamin C transporters.

Authors:  C I Rivas; F A Zúñiga; A Salas-Burgos; L Mardones; V Ormazabal; J C Vera
Journal:  J Physiol Biochem       Date:  2008-12       Impact factor: 4.158

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