Literature DB >> 15336407

Continuous culture of Methanococcus maripaludis under defined nutrient conditions.

Andrew K Haydock1, Iris Porat, William B Whitman, John A Leigh.   

Abstract

To study global regulation in the methanogenic archaeon Methanococcus maripaludis, we devised a system for steady-state growth in chemostats. New Brunswick Bioflo 110 bioreactors were equipped with controlled delivery of hydrogen, nitrogen, carbon dioxide, hydrogen sulfide, and anaerobic medium. We determined conditions and media compositions for growth with three different limiting nutrients, hydrogen, phosphate, and leucine. To investigate leucine limitation we constructed and characterized a mutant in the leuA gene for 2-isopropylmalate synthase, demonstrating for the first time the function of this gene in the Archaea. Steady state specific growth rates in these studies ranged from 0.042 to 0.24 h(-1). Plots of culture density vs. growth rate for each condition showed the behavior predicted by growth modeling. The results show that growth behavior is normal and reproducible and validate the use of the chemostat system for metabolic and global regulation studies in M. maripaludis.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15336407     DOI: 10.1016/j.femsle.2004.07.021

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  22 in total

1.  Protein complexing in a methanogen suggests electron bifurcation and electron delivery from formate to heterodisulfide reductase.

Authors:  Kyle C Costa; Phoebe M Wong; Tiansong Wang; Thomas J Lie; Jeremy A Dodsworth; Ingrid Swanson; June A Burn; Murray Hackett; John A Leigh
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

2.  Global responses of Methanococcus maripaludis to specific nutrient limitations and growth rate.

Authors:  Erik L Hendrickson; Yuchen Liu; Guillermina Rosas-Sandoval; Iris Porat; Dieter Söll; William B Whitman; John A Leigh
Journal:  J Bacteriol       Date:  2008-01-18       Impact factor: 3.490

3.  Parallel evolution of transcriptome architecture during genome reorganization.

Authors:  Sung Ho Yoon; David J Reiss; J Christopher Bare; Dan Tenenbaum; Min Pan; Joseph Slagel; Robert L Moritz; Sujung Lim; Murray Hackett; Angeli Lal Menon; Michael W W Adams; Adam Barnebey; Steven M Yannone; John A Leigh; Nitin S Baliga
Journal:  Genome Res       Date:  2011-07-12       Impact factor: 9.043

4.  Overlapping repressor binding sites regulate expression of the Methanococcus maripaludis glnK(1) operon.

Authors:  Thomas J Lie; Erik L Hendrickson; Ulf M Niess; Brian C Moore; Andrew K Haydock; John A Leigh
Journal:  Mol Microbiol       Date:  2009-12-16       Impact factor: 3.501

5.  Development of Multiwell-Plate Methods Using Pure Cultures of Methanogens To Identify New Inhibitors for Suppressing Ruminant Methane Emissions.

Authors:  M R Weimar; J Cheung; D Dey; C McSweeney; M Morrison; Y Kobayashi; W B Whitman; V Carbone; L R Schofield; R S Ronimus; G M Cook
Journal:  Appl Environ Microbiol       Date:  2017-07-17       Impact factor: 4.792

6.  Disruption of the operon encoding Ehb hydrogenase limits anabolic CO2 assimilation in the archaeon Methanococcus maripaludis.

Authors:  Iris Porat; Wonduck Kim; Erik L Hendrickson; Qiangwei Xia; Yi Zhang; Tiansong Wang; Fred Taub; Brian C Moore; Iain J Anderson; Murray Hackett; John A Leigh; William B Whitman
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

7.  Effects of H2 and formate on growth yield and regulation of methanogenesis in Methanococcus maripaludis.

Authors:  Kyle C Costa; Sung Ho Yoon; Min Pan; June A Burn; Nitin S Baliga; John A Leigh
Journal:  J Bacteriol       Date:  2013-01-18       Impact factor: 3.490

8.  Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.

Authors:  E L Hendrickson; R Kaul; Y Zhou; D Bovee; P Chapman; J Chung; E Conway de Macario; J A Dodsworth; W Gillett; D E Graham; M Hackett; A K Haydock; A Kang; M L Land; R Levy; T J Lie; T A Major; B C Moore; I Porat; A Palmeiri; G Rouse; C Saenphimmachak; D Söll; S Van Dien; T Wang; W B Whitman; Q Xia; Y Zhang; F W Larimer; M V Olson; J A Leigh
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

9.  VhuD facilitates electron flow from H2 or formate to heterodisulfide reductase in Methanococcus maripaludis.

Authors:  Kyle C Costa; Thomas J Lie; Qin Xia; John A Leigh
Journal:  J Bacteriol       Date:  2013-09-13       Impact factor: 3.490

10.  Quantitative proteomics of nutrient limitation in the hydrogenotrophic methanogen Methanococcus maripaludis.

Authors:  Qiangwei Xia; Tiansong Wang; Erik L Hendrickson; Thomas J Lie; Murray Hackett; John A Leigh
Journal:  BMC Microbiol       Date:  2009-07-23       Impact factor: 3.605

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.