Literature DB >> 15332979

Ionic effect on combing of single DNA molecules and observation of their force-induced melting by fluorescence microscopy.

Yu-Ying Liu1, Peng-Ye Wang, Shuo-Xing Dou, Wei-Chi Wang, Ping Xie, Hua-Wei Yin, Xing-Dong Zhang, Xu Guang Xi.   

Abstract

Molecular combing is a powerful and simple method for aligning DNA molecules onto a surface. Using this technique combined with fluorescence microscopy, we observed that the length of lambda-DNA molecules was extended to about 1.6 times their contour length (unextended length, 16.2 microm) by the combing method on hydrophobic polymethylmetacrylate coated surfaces. The effects of sodium and magnesium ions and pH of the DNA solution were investigated. Interestingly, we observed force-induced melting of single DNA molecules. (c) 2004 American Institute of Physics

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Year:  2004        PMID: 15332979     DOI: 10.1063/1.1777220

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  6 in total

1.  Novel, monomeric cyanine dyes as reporters for DNA helicase activity.

Authors:  Cuiling Xu; Mykhaylo Yu Losytskyy; Vladyslava B Kovalska; Dmytro V Kryvorotenko; Sergiy M Yarmoluk; Sarah McClelland; Piero R Bianco
Journal:  J Fluoresc       Date:  2007-08-03       Impact factor: 2.217

2.  Discrimination of Adsorbed Double-Stranded and Single-Stranded DNA Molecules on Surfaces by Fluorescence Emission Spectroscopy Using Acridine Orange Dye.

Authors:  E Hoory; J Budassi; E Pfeffer; N Cho; J Thalappillil; J Andersen; M Rafailovich; J Sokolov
Journal:  J Fluoresc       Date:  2017-08-05       Impact factor: 2.217

3.  A simple cut and stretch assay to detect antimicrobial resistance genes on bacterial plasmids by single-molecule fluorescence microscopy.

Authors:  Gaurav Goyal; Elina Ekedahl; My Nyblom; Jens Krog; Erik Fröbrant; Magnus Brander; Tsegaye Sewunet; Teerawit Tangkoskul; Christian G Giske; Linus Sandegren; Visanu Thamlikitkul; Tobias Ambjörnsson; Fredrik Westerlund
Journal:  Sci Rep       Date:  2022-06-03       Impact factor: 4.996

4.  Detection of single DNA molecules by multicolor quantum-dot end-labeling.

Authors:  Aurélien Crut; Bénédicte Géron-Landre; Isabelle Bonnet; Stéphane Bonneau; Pierre Desbiolles; Christophe Escudé
Journal:  Nucleic Acids Res       Date:  2005-06-20       Impact factor: 16.971

5.  Combing of genomic DNA from droplets containing picograms of material.

Authors:  Jochem Deen; Wouter Sempels; Raf De Dier; Jan Vermant; Peter Dedecker; Johan Hofkens; Robert K Neely
Journal:  ACS Nano       Date:  2015-01-08       Impact factor: 15.881

6.  Molecular Combing of Single DNA Molecules on the 10 Megabase Scale.

Authors:  Atanas Kaykov; Thibaud Taillefumier; Aaron Bensimon; Paul Nurse
Journal:  Sci Rep       Date:  2016-01-19       Impact factor: 4.379

  6 in total

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