Literature DB >> 1533044

Integration of human immunodeficiency virus DNA: adduct interference analysis of required DNA sites.

F D Bushman1, R Craigie.   

Abstract

The integration (IN) protein encoded by human immunodeficiency virus directs the integration of viral DNA into host DNA. We have probed the DNA sites required for the function of IN protein by attaching adducts to model DNA substrates and assaying their effects on integration in vitro. These experiments reveal that modifications in a short region on both DNA strands at the ends of the viral DNA block IN protein function. Modification of the target DNA near the point of DNA strand transfer also blocks IN protein function. Further experiments suggest that distinct subsets of the identified interactions are important for separate steps in the integration process.

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Year:  1992        PMID: 1533044      PMCID: PMC48887          DOI: 10.1073/pnas.89.8.3458

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Retroviral integration: structure of the initial covalent product and its precursor, and a role for the viral IN protein.

Authors:  P O Brown; B Bowerman; H E Varmus; J M Bishop
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

2.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

3.  Requirement of the avian retrovirus pp32 DNA binding protein domain for replication.

Authors:  P J Hippenmeyer; D P Grandgenett
Journal:  Virology       Date:  1984-09       Impact factor: 3.616

4.  Sequence of the circle junction of human immunodeficiency virus type 1: implications for reverse transcription and integration.

Authors:  J M Whitcomb; R Kumar; S H Hughes
Journal:  J Virol       Date:  1990-10       Impact factor: 5.103

5.  Activities of human immunodeficiency virus (HIV) integration protein in vitro: specific cleavage and integration of HIV DNA.

Authors:  F D Bushman; R Craigie
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

6.  Substrate specificity of recombinant human immunodeficiency virus integrase protein.

Authors:  R L LaFemina; P L Callahan; M G Cordingley
Journal:  J Virol       Date:  1991-10       Impact factor: 5.103

7.  Retroviral DNA integration: structure of an integration intermediate.

Authors:  T Fujiwara; K Mizuuchi
Journal:  Cell       Date:  1988-08-12       Impact factor: 41.582

8.  Ethylation interference and X-ray crystallography identify similar interactions between 434 repressor and operator.

Authors:  F D Bushman; J E Anderson; S C Harrison; M Ptashne
Journal:  Nature       Date:  1985 Aug 15-21       Impact factor: 49.962

9.  A mutant murine leukemia virus with a single missense codon in pol is defective in a function affecting integration.

Authors:  L A Donehower; H E Varmus
Journal:  Proc Natl Acad Sci U S A       Date:  1984-10       Impact factor: 11.205

10.  Contacts between gamma delta resolvase and the gamma delta res site.

Authors:  E Falvey; N D Grindley
Journal:  EMBO J       Date:  1987-03       Impact factor: 11.598

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  25 in total

Review 1.  HIV DNA integration.

Authors:  Robert Craigie; Frederic D Bushman
Journal:  Cold Spring Harb Perspect Med       Date:  2012-07       Impact factor: 6.915

2.  Chromosome structure and human immunodeficiency virus type 1 cDNA integration: centromeric alphoid repeats are a disfavored target.

Authors:  S Carteau; C Hoffmann; F Bushman
Journal:  J Virol       Date:  1998-05       Impact factor: 5.103

3.  Transposase makes critical contacts with, and is stimulated by, single-stranded DNA at the P element termini in vitro.

Authors:  E L Beall; D C Rio
Journal:  EMBO J       Date:  1998-04-01       Impact factor: 11.598

4.  Influence of subterminal viral DNA nucleotides on differential susceptibility to cleavage by human immunodeficiency virus type 1 and visna virus integrases.

Authors:  M Katzman; M Sudol
Journal:  J Virol       Date:  1996-12       Impact factor: 5.103

5.  Effects of mutations in residues near the active site of human immunodeficiency virus type 1 integrase on specific enzyme-substrate interactions.

Authors:  J L Gerton; S Ohgi; M Olsen; J DeRisi; P O Brown
Journal:  J Virol       Date:  1998-06       Impact factor: 5.103

6.  Substrate features important for recognition and catalysis by human immunodeficiency virus type 1 integrase identified by using novel DNA substrates.

Authors:  S A Chow; P O Brown
Journal:  J Virol       Date:  1994-06       Impact factor: 5.103

7.  Determinants of the establishment of human immunodeficiency virus type 1 latency.

Authors:  Alexandra Duverger; Jennifer Jones; Jori May; Frederic Bibollet-Ruche; Frederic A Wagner; Randall Q Cron; Olaf Kutsch
Journal:  J Virol       Date:  2009-01-14       Impact factor: 5.103

8.  Retroviral integration: in vitro host site selection by avian integrase.

Authors:  M L Fitzgerald; D P Grandgenett
Journal:  J Virol       Date:  1994-07       Impact factor: 5.103

9.  On the general theory of the origins of retroviruses.

Authors:  Misaki Wayengera
Journal:  Theor Biol Med Model       Date:  2010-02-16       Impact factor: 2.432

10.  Metal binding by the D,DX35E motif of human immunodeficiency virus type 1 integrase: selective rescue of Cys substitutions by Mn2+ in vitro.

Authors:  Kui Gao; Steven Wong; Frederic Bushman
Journal:  J Virol       Date:  2004-07       Impact factor: 5.103

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