Literature DB >> 15329661

High variability of chloroplast DNA in three Mediterranean evergreen oaks indicates complex evolutionary history.

P Jiménez1, U López de Heredia, C Collada, Z Lorenzo, L Gil.   

Abstract

Chloroplast DNA variation was studied in three evergreen Quercus species (Q. suber L., Q. ilex L. and Q. coccifera L.) from the Western Mediterranean Basin using PCR-RFLP. We studied five primer pair/enzyme combinations, four of them previously used in other European Quercus, obtaining a large number of haplotypes (81) grouped in three main types (suber type, ilex-coccifera I type and ilex-coccifera II type). Such level of haplotype diversity is higher than previously reported for the genus. Remarkable differences in haplotype richness between species have been found. Q. ilex and Q. coccifera usually share the same haplotypes, while a number of Q. suber populations possesses variants of the ilex-coccifera I type. This fact is interpreted as a result of genetic introgression between Q. suber and Q. ilex. Reproductive factors that could determine this exchange are discussed, as well as the influence of different species histories on the present structure of evergreen Quercus in the Western Mediterranean Basin.

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Year:  2004        PMID: 15329661     DOI: 10.1038/sj.hdy.6800551

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  7 in total

1.  Phylogeographical variation of chloroplast DNA in cork oak (Quercus suber).

Authors:  Roselyne Lumaret; Mathieu Tryphon-Dionnet; Henri Michaud; Aurélie Sanuy; Emilie Ipotesi; Céline Born; Céline Mir
Journal:  Ann Bot       Date:  2005-08-15       Impact factor: 4.357

2.  Ancient and current gene flow between two distantly related Mediterranean oak species, Quercus suber and Q. ilex.

Authors:  Roselyne Lumaret; Roula Jabbour-Zahab
Journal:  Ann Bot       Date:  2009-06-25       Impact factor: 4.357

3.  Taxonomic and ecological discrimination of Fagaceae species based on internal transcribed spacer polymerase chain reaction-restriction fragment length polymorphism.

Authors:  João Paulo Coutinho; Ana Carvalho; José Lima-Brito
Journal:  AoB Plants       Date:  2014-11-26       Impact factor: 3.276

Review 4.  A review of the prevalence, utility, and caveats of using chloroplast simple sequence repeats for studies of plant biology.

Authors:  Gregory L Wheeler; Hanna E Dorman; Alenda Buchanan; Lavanya Challagundla; Lisa E Wallace
Journal:  Appl Plant Sci       Date:  2014-11-20       Impact factor: 1.936

5.  Plastid Genome Comparative and Phylogenetic Analyses of the Key Genera in Fagaceae: Highlighting the Effect of Codon Composition Bias in Phylogenetic Inference.

Authors:  Yanci Yang; Juan Zhu; Li Feng; Tao Zhou; Guoqing Bai; Jia Yang; Guifang Zhao
Journal:  Front Plant Sci       Date:  2018-02-01       Impact factor: 5.753

6.  ddRAD Sequencing-Based Identification of Genomic Boundaries and Permeability in Quercus ilex and Q. suber Hybrids.

Authors:  Unai López de Heredia; Fernando Mora-Márquez; Pablo G Goicoechea; Laura Guillardín-Calvo; Marco C Simeone; Álvaro Soto
Journal:  Front Plant Sci       Date:  2020-09-04       Impact factor: 5.753

7.  High genetic diversity and stable Pleistocene distributional ranges in the widespread Mexican red oak Quercus castanea Née (1801) (Fagaceae).

Authors:  Juan Manuel Peñaloza-Ramírez; Hernando Rodríguez-Correa; Antonio González-Rodríguez; Víctor Rocha-Ramírez; Ken Oyama
Journal:  Ecol Evol       Date:  2020-03-24       Impact factor: 2.912

  7 in total

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