Literature DB >> 15326599

An electrostatic basis for the stability of thermophilic proteins.

Brian N Dominy1, Hervé Minoux, Charles L Brooks.   

Abstract

Two factors provide key contributions to the stability of thermophilic proteins relative to their mesophilic homologues: electrostatic interactions of charged residues in the folded state and the dielectric response of the folded protein. The dielectric response for proteins in a "thermophilic series" globally modulates the thermal stability of its members, with the calculated dielectric constant for the protein increasing from mesophiles to hyperthermophiles. This variability results from differences in the distribution of charged residues on the surface of the protein, in agreement with structural and genetic observations. Furthermore, the contribution of electrostatic interactions to the stability of the folded state is more favorable for thermophilic proteins than for their mesophilic homologues. This leads to the conclusion that electrostatic interactions play an important role in determining the stability of proteins at high temperatures. The interplay between electrostatic interactions and dielectric response also provides further rationalization for the enhanced stability of thermophilic proteins with respect to cold-denaturation. Taken together, the distribution of charged residues and their fluctuations have been shown to be factors in modulating protein stability over the entire range of biologically relevant temperatures. Copyright 2004 Wiley-Liss, Inc.

Mesh:

Substances:

Year:  2004        PMID: 15326599     DOI: 10.1002/prot.20190

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  31 in total

1.  Physical limits of cells and proteomes.

Authors:  Ken A Dill; Kingshuk Ghosh; Jeremy D Schmit
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

2.  Physics and evolution of thermophilic adaptation.

Authors:  Igor N Berezovsky; Eugene I Shakhnovich
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-24       Impact factor: 11.205

3.  Hydrophobicity density profiles to predict thermal stability enhancement in proteins.

Authors:  Angel Mozo-Villarías; Juan Cedano; Enrique Querol
Journal:  Protein J       Date:  2006-12       Impact factor: 2.371

4.  Salt bridges: geometrically specific, designable interactions.

Authors:  Jason E Donald; Daniel W Kulp; William F DeGrado
Journal:  Proteins       Date:  2011-01-05

Review 5.  Recent advances in implicit solvent-based methods for biomolecular simulations.

Authors:  Jianhan Chen; Charles L Brooks; Jana Khandogin
Journal:  Curr Opin Struct Biol       Date:  2008-03-04       Impact factor: 6.809

6.  Carboxyl pK(a) values, ion pairs, hydrogen bonding, and the pH-dependence of folding the hyperthermophile proteins Sac7d and Sso7d.

Authors:  Andrew T Clark; Kelley Smith; Ranjith Muhandiram; Stephen P Edmondson; John W Shriver
Journal:  J Mol Biol       Date:  2007-07-10       Impact factor: 5.469

7.  How do thermophilic proteins and proteomes withstand high temperature?

Authors:  Lucas Sawle; Kingshuk Ghosh
Journal:  Biophys J       Date:  2011-07-06       Impact factor: 4.033

Review 8.  Antibody-Drug Conjugates: Design, Formulation and Physicochemical Stability.

Authors:  Satish K Singh; Donna L Luisi; Roger H Pak
Journal:  Pharm Res       Date:  2015-05-19       Impact factor: 4.200

9.  Modulation of folding energy landscape by charge-charge interactions: linking experiments with computational modeling.

Authors:  Franco O Tzul; Katrina L Schweiker; George I Makhatadze
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-06       Impact factor: 11.205

10.  A multi-factors rational design strategy for enhancing the thermostability of Escherichia coli AppA phytase.

Authors:  Baojin Fei; Hui Xu; Yu Cao; Shuhan Ma; Hongxiu Guo; Tao Song; Dairong Qiao; Yi Cao
Journal:  J Ind Microbiol Biotechnol       Date:  2013-03-14       Impact factor: 3.346

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.