Literature DB >> 15324090

Dynamics of gene regulatory networks with cell division cycle.

Luonan Chen1, Ruiqi Wang, Tetsuya J Kobayashi, Kazuyuki Aihara.   

Abstract

This paper focuses on modeling and analyzing the nonlinear dynamics of gene regulatory networks with the consideration of a cell division cycle with duplication process of DNA, in particular for switches and oscillators of synthetic networks. We derive two models that may correspond to the eukaryotic and prokaryotic cells, respectively. A biologically plausible three-gene model ( lac, tetR, and cI ) and a repressilator as switch and oscillator examples are used to illustrate our theoretical results. We show that the cell cycle may play a significant role in gene regulation due to the nonlinear dynamics of a gene regulatory network although gene expressions are usually tightly controlled by transcriptional factors.

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Year:  2004        PMID: 15324090     DOI: 10.1103/PhysRevE.70.011909

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  3 in total

Review 1.  A comparative analysis of synthetic genetic oscillators.

Authors:  Oliver Purcell; Nigel J Savery; Claire S Grierson; Mario di Bernardo
Journal:  J R Soc Interface       Date:  2010-06-30       Impact factor: 4.118

2.  Robust stability of stochastic delayed genetic regulatory networks.

Authors:  Zhengxia Wang; Guodong Liu; Yanhong Sun; Hongli Wu
Journal:  Cogn Neurodyn       Date:  2009-07-30       Impact factor: 5.082

3.  Intrinsic and extrinsic noise of gene expression in lineage trees.

Authors:  Philipp Thomas
Journal:  Sci Rep       Date:  2019-01-24       Impact factor: 4.379

  3 in total

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