Literature DB >> 15322879

Conservation of functional domain structure in bicarbonate-regulated "soluble" adenylyl cyclases in bacteria and eukaryotes.

Mime Kobayashi1, Jochen Buck, Lonny R Levin.   

Abstract

Soluble adenylyl cyclase (sAC) is an evolutionarily conserved bicarbonate sensor. In mammals, it is responsible for bicarbonate-induced, cAMP-dependent processes in sperm required for fertilization and postulated to be involved in other bicarbonate- and carbon dioxide-dependent functions throughout the body. Among eukaryotes, sAC-like cyclases have been detected in mammals and in the fungi Dictyostelium; these enzymes display extensive similarity extending through two cyclase catalytic domains and a long carboxy terminal extension. sAC-like cyclases are also found in a number of bacterial phyla (Cyanobacteria, Actinobacteria, and Proteobacteria), but these enzymes generally possess only a single catalytic domain and little, if any, homology with the remainder of the mammalian protein. Database mining through a number of recently sequenced genomes identified sAC orthologues in additional metazoan phyla (Arthropoda and Chordata) and additional bacterial phyla (Chloroflexi). Interestingly, the Chloroflexi sAC-like cyclases, a family of three enzymes from the thermophilic eubacterium, Chloroflexus aurantiacus, are more similar to eukaryotic sAC-like cyclases (i.e., mammalian sAC and Dictyostelium SgcA) than they are to other bacterial adenylyl cyclases (ACs) (i.e., from Cyanobacteria). The Chloroflexus sAC-like cyclases each possess two cyclase catalytic domains and extensive similarity with mammalian enzymes through their carboxy termini. We cloned one of the Chloroflexus sAC-like cyclases and confirmed it to be stimulated by bicarbonate. These data extend the family of organisms possessing bicarbonate-responsive ACs to numerous phyla within the bacterial and eukaryotic kingdoms.

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Year:  2004        PMID: 15322879      PMCID: PMC3644946          DOI: 10.1007/s00427-004-0432-2

Source DB:  PubMed          Journal:  Dev Genes Evol        ISSN: 0949-944X            Impact factor:   0.900


  23 in total

1.  Class III nucleotide cyclases in bacteria and archaebacteria: lineage-specific expansion of adenylyl cyclases and a dearth of guanylyl cyclases.

Authors:  Avinash R Shenroy; Sandhya S Visweswariah
Journal:  FEBS Lett       Date:  2004-03-12       Impact factor: 4.124

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4.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

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Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

5.  The effect of divalent cations on bovine spermatozoal adenylate cyclase activity.

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Journal:  J Cyclic Nucleotide Res       Date:  1975

Review 6.  Bicarbonate-regulated soluble adenylyl cyclase.

Authors:  M S Wuttke; J Buck; L R Levin
Journal:  JOP       Date:  2001-07

7.  Mice deficient for soluble adenylyl cyclase are infertile because of a severe sperm-motility defect.

Authors:  Gloria Esposito; Bijay S Jaiswal; Fang Xie; Magda A M Krajnc-Franken; Tamara J A A Robben; Ankie M Strik; Cor Kuil; Ria L A Philipsen; Marcel van Duin; Marco Conti; Jan A Gossen; Byjay S Jaiswal
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-19       Impact factor: 11.205

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Authors:  W J Tang; A G Gilman
Journal:  Science       Date:  1995-06-23       Impact factor: 47.728

10.  Bicarbonate-responsive "soluble" adenylyl cyclase defines a nuclear cAMP microdomain.

Authors:  Jonathan H Zippin; Jeanne Farrell; David Huron; Margarita Kamenetsky; Kenneth C Hess; Donald A Fischman; Lonny R Levin; Jochen Buck
Journal:  J Cell Biol       Date:  2004-02-09       Impact factor: 10.539

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  16 in total

Review 1.  Molecular details of cAMP generation in mammalian cells: a tale of two systems.

Authors:  Margarita Kamenetsky; Sabine Middelhaufe; Erin M Bank; Lonny R Levin; Jochen Buck; Clemens Steegborn
Journal:  J Mol Biol       Date:  2006-07-28       Impact factor: 5.469

2.  Crystal structures of human soluble adenylyl cyclase reveal mechanisms of catalysis and of its activation through bicarbonate.

Authors:  Silke Kleinboelting; Ana Diaz; Sebastien Moniot; Joop van den Heuvel; Michael Weyand; Lonny R Levin; Jochen Buck; Clemens Steegborn
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-24       Impact factor: 11.205

3.  Regulation of prokaryotic adenylyl cyclases by CO2.

Authors:  Arne Hammer; David R W Hodgson; Martin J Cann
Journal:  Biochem J       Date:  2006-06-01       Impact factor: 3.857

4.  Bicarbonate-sensing soluble adenylyl cyclase is an essential sensor for acid/base homeostasis.

Authors:  Martin Tresguerres; Scott K Parks; Eric Salazar; Lonny R Levin; Greg G Goss; Jochen Buck
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

5.  Cyanobacteriochrome-based photoswitchable adenylyl cyclases (cPACs) for broad spectrum light regulation of cAMP levels in cells.

Authors:  Matthew Blain-Hartung; Nathan C Rockwell; Marcus V Moreno; Shelley S Martin; Fei Gan; Donald A Bryant; J Clark Lagarias
Journal:  J Biol Chem       Date:  2018-04-09       Impact factor: 5.157

6.  Stimulation of mammalian G-protein-responsive adenylyl cyclases by carbon dioxide.

Authors:  Philip D Townsend; Phillip M Holliday; Stepan Fenyk; Kenneth C Hess; Michael A Gray; David R W Hodgson; Martin J Cann
Journal:  J Biol Chem       Date:  2008-11-13       Impact factor: 5.157

Review 7.  Physiological sensing of carbon dioxide/bicarbonate/pH via cyclic nucleotide signaling.

Authors:  Jochen Buck; Lonny R Levin
Journal:  Sensors (Basel)       Date:  2011       Impact factor: 3.576

8.  Characterization of Plasmodium falciparum adenylyl cyclase-β and its role in erythrocytic stage parasites.

Authors:  Eric Salazar; Erin M Bank; Nicole Ramsey; Kenneth C Hess; Kirk W Deitsch; Lonny R Levin; Jochen Buck
Journal:  PLoS One       Date:  2012-06-26       Impact factor: 3.240

9.  Comparative genomic analysis suggests that the sperm-specific sodium/proton exchanger and soluble adenylyl cyclase are key regulators of CatSper among the Metazoa.

Authors:  Francisco Romero; Takuya Nishigaki
Journal:  Zoological Lett       Date:  2019-07-26       Impact factor: 2.836

10.  High adenylyl cyclase activity and in vivo cAMP fluctuations in corals suggest central physiological role.

Authors:  K L Barott; Y Helman; L Haramaty; M E Barron; K C Hess; J Buck; L R Levin; M Tresguerres
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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