Literature DB >> 15317458

Classification of kinase inhibitors using a Bayesian model.

Xiaoyang Xia1, Edward G Maliski, Paul Gallant, David Rogers.   

Abstract

The use of Bayesian statistics to model both general (multifamily) and specific (single-target) kinase inhibitors is investigated. The approach demonstrates an alternative to current computational methods applied to heterogeneous structure/activity data sets. This approach operates rapidly and is readily modifiable as required. A generalized model generated using inhibitor data from multiple kinase classes shows meaningful enrichment for several specific kinase targets. Such an approach can be used to prioritize compounds for screening or to optimally select compounds from third-party data collections. The observed benefit of the approach is finding compounds that are not structurally related to known actives, or novel targets for which there is not enough information to build a specific kinase model. The general kinase model described was built from a basis of mostly tyrosine kinase inhibitors, with some serine/threonine inhibitors; all the test cases used in prediction were also on tyrosine kinase targets. Confirming the applicability of this technique to other kinase families will be determined once those biological assays become available.

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Year:  2004        PMID: 15317458     DOI: 10.1021/jm0303195

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  85 in total

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2.  Quantitative structure-activity relationship analysis of β-amyloid aggregation inhibitors.

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Review 6.  Chemogenomic approaches to rational drug design.

Authors:  D Rognan
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7.  Quantifying the relationships among drug classes.

Authors:  Jérôme Hert; Michael J Keiser; John J Irwin; Tudor I Oprea; Brian K Shoichet
Journal:  J Chem Inf Model       Date:  2008-03-13       Impact factor: 4.956

8.  Enhancement of chemical rules for predicting compound reactivity towards protein thiol groups.

Authors:  James T Metz; Jeffrey R Huth; Philip J Hajduk
Journal:  J Comput Aided Mol Des       Date:  2007-03-06       Impact factor: 3.686

9.  Robust optimization of scoring functions for a target class.

Authors:  Markus H J Seifert
Journal:  J Comput Aided Mol Des       Date:  2009-05-27       Impact factor: 3.686

10.  Kinome-wide activity modeling from diverse public high-quality data sets.

Authors:  Stephan C Schürer; Steven M Muskal
Journal:  J Chem Inf Model       Date:  2013-01-09       Impact factor: 4.956

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