Literature DB >> 15306736

A neural network model of chemotaxis predicts functions of synaptic connections in the nematode Caenorhabditis elegans.

Nathan A Dunn1, Shawn R Lockery, Jonathan T Pierce-Shimomura, John S Conery.   

Abstract

The anatomical connectivity of the nervous system of the nematode Caenorhabditis elegans has been almost completely described, but determination of the neurophysiological basis of behavior in this system is just beginning. Here we used an optimization algorithm to search for patterns of connectivity sufficient to compute the sensorimotor transformation underlying C. elegans chemotaxis, a simple form of spatial orientation behavior in which turning probability is modulated by the rate of change of chemical concentration. Optimization produced differentiator networks capable of simulating chemotaxis. A surprising feature of these networks was inhibitory feedback connections on all neurons. Further analysis showed that feedback regulates the latency between sensory input and behavior. Common patterns of connectivity between the model and biological networks suggest new functions for previously identified connections in the C. elegans nervous system.

Entities:  

Mesh:

Year:  2004        PMID: 15306736     DOI: 10.1023/B:JCNS.0000037679.42570.d5

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  15 in total

1.  The structure of the nervous system of the nematode Caenorhabditis elegans.

Authors:  J G White; E Southgate; J N Thomson; S Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-11-12       Impact factor: 6.237

2.  Chemosensory neurons with overlapping functions direct chemotaxis to multiple chemicals in C. elegans.

Authors:  C I Bargmann; H R Horvitz
Journal:  Neuron       Date:  1991-11       Impact factor: 17.173

3.  Tight-seal whole-cell patch clamping of Caenorhabditis elegans neurons.

Authors:  S R Lockery; M B Goodman
Journal:  Methods Enzymol       Date:  1998       Impact factor: 1.600

4.  Signaling properties of Ascaris motorneurons: graded active responses, graded synaptic transmission, and tonic transmitter release.

Authors:  R E Davis; A O Stretton
Journal:  J Neurosci       Date:  1989-02       Impact factor: 6.167

5.  Passive membrane properties of motorneurons and their role in long-distance signaling in the nematode Ascaris.

Authors:  R E Davis; A O Stretton
Journal:  J Neurosci       Date:  1989-02       Impact factor: 6.167

6.  The neural circuit for touch sensitivity in Caenorhabditis elegans.

Authors:  M Chalfie; J E Sulston; J G White; E Southgate; J N Thomson; S Brenner
Journal:  J Neurosci       Date:  1985-04       Impact factor: 6.167

7.  Neuronal control of locomotion in C. elegans is modified by a dominant mutation in the GLR-1 ionotropic glutamate receptor.

Authors:  Y Zheng; P J Brockie; J E Mellem; D M Madsen; A V Maricq
Journal:  Neuron       Date:  1999-10       Impact factor: 17.173

8.  The fundamental role of pirouettes in Caenorhabditis elegans chemotaxis.

Authors:  J T Pierce-Shimomura; T M Morse; S R Lockery
Journal:  J Neurosci       Date:  1999-11-01       Impact factor: 6.167

9.  Electron microscopical reconstruction of the anterior sensory anatomy of the nematode Caenorhabditis elegans.?2UU.

Authors:  S Ward; N Thomson; J G White; S Brenner
Journal:  J Comp Neurol       Date:  1975-04-01       Impact factor: 3.215

10.  Wave Forms of Caenorhabditis elegans in a Chemical Attractant and Repellent and in Thermal Gradients.

Authors:  T A Rutherford; N A Croll
Journal:  J Nematol       Date:  1979-07       Impact factor: 1.402

View more
  14 in total

1.  Inhibitory control by an integral feedback signal in prefrontal cortex: a model of discrimination between sequential stimuli.

Authors:  Paul Miller; Xiao-Jing Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-21       Impact factor: 11.205

2.  Understanding complex behaviors by analyzing optimized models: C. elegans gradient navigation.

Authors:  Serge Thill; Tim C Pearce
Journal:  HFSP J       Date:  2007-10-15

3.  The role of multiple chemotactic mechanisms in a model of chemotaxis in C. elegans: different mechanisms are specialised for different environments.

Authors:  Peter A Appleby
Journal:  J Comput Neurosci       Date:  2013-08-14       Impact factor: 1.621

4.  Biological modeling of complex chemotaxis behaviors for C. elegans under speed regulation--a dynamic neural networks approach.

Authors:  Jian-Xin Xu; Xin Deng
Journal:  J Comput Neurosci       Date:  2013-01-19       Impact factor: 1.621

5.  Modeling the thermotaxis behavior of C.elegans based on the artificial neural network.

Authors:  Mingxu Li; Xin Deng; Jin Wang; Qiaosong Chen; Yun Tang
Journal:  Bioengineered       Date:  2016-07-03       Impact factor: 3.269

Review 6.  The computational worm: spatial orientation and its neuronal basis in C. elegans.

Authors:  Shawn R Lockery
Journal:  Curr Opin Neurobiol       Date:  2011-07-18       Impact factor: 6.627

7.  Description and validation of a dynamical systems model of presynaptic serotonin function: genetic variation, brain activation and impulsivity.

Authors:  Scott F Stoltenberg; Parthasarathi Nag
Journal:  Behav Genet       Date:  2010-01-29       Impact factor: 2.805

8.  Evolution and analysis of minimal neural circuits for klinotaxis in Caenorhabditis elegans.

Authors:  Eduardo J Izquierdo; Shawn R Lockery
Journal:  J Neurosci       Date:  2010-09-29       Impact factor: 6.167

9.  On optical detection of densely labeled synapses in neuropil and mapping connectivity with combinatorially multiplexed fluorescent synaptic markers.

Authors:  Yuriy Mishchenko
Journal:  PLoS One       Date:  2010-01-22       Impact factor: 3.240

10.  An olfactory neuron responds stochastically to temperature and modulates Caenorhabditis elegans thermotactic behavior.

Authors:  David Biron; Sara Wasserman; James H Thomas; Aravinthan D T Samuel; Piali Sengupta
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-30       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.