Literature DB >> 15304640

Spatial patterns of gene expression in the olfactory bulb.

David M Lin1, Yee Hwa Yang, Jonathan A Scolnick, Lisa J Brunet, Heather Marsh, Vivian Peng, Yasushi Okazaki, Yoshihide Hayashizaki, Terence P Speed, John Ngai.   

Abstract

How olfactory sensory neurons converge on spatially invariant glomeruli in the olfactory bulb is largely unknown. In one model, olfactory sensory neurons interact with spatially restricted guidance cues in the bulb that orient and guide them to their target. Identifying differentially expressed molecules in the olfactory bulb has been extremely difficult, however, hindering a molecular analysis of convergence. Here, we describe several such genes that have been identified in a screen that compiled microarray data to create a three-dimensional model of gene expression within the mouse olfactory bulb. The expression patterns of these identified genes form the basis of a nascent spatial map of differential gene expression in the bulb.

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Year:  2004        PMID: 15304640      PMCID: PMC515121          DOI: 10.1073/pnas.0404872101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

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  12 in total

1.  Transcription factors expressed in olfactory bulb local progenitor cells revealed by genome-wide transcriptome profiling.

Authors:  Gordon R O Campbell; Ariane Baudhuin; Karen Vranizan; John Ngai
Journal:  Mol Cell Neurosci       Date:  2010-12-29       Impact factor: 4.314

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Journal:  Nat Methods       Date:  2020-07-13       Impact factor: 28.547

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Authors:  Cynthia D Duggan; Shannon DeMaria; Ariane Baudhuin; David Stafford; John Ngai
Journal:  J Neurosci       Date:  2008-05-14       Impact factor: 6.167

6.  Normalization of boutique two-color microarrays with a high proportion of differentially expressed probes.

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7.  Genome-scale investigation of olfactory system spatial heterogeneity.

Authors:  Torben Noto; Derrick Barnagian; Jason B Castro
Journal:  PLoS One       Date:  2017-05-24       Impact factor: 3.240

8.  Pax3 and Zic1 trigger the early neural crest gene regulatory network by the direct activation of multiple key neural crest specifiers.

Authors:  Jean-Louis Plouhinec; Daniel D Roche; Caterina Pegoraro; Ana Leonor Figueiredo; Frédérique Maczkowiak; Lisa J Brunet; Cécile Milet; Jean-Philippe Vert; Nicolas Pollet; Richard M Harland; Anne H Monsoro-Burq
Journal:  Dev Biol       Date:  2013-12-17       Impact factor: 3.582

9.  Novel subdomains of the mouse olfactory bulb defined by molecular heterogeneity in the nascent external plexiform and glomerular layers.

Authors:  Eric O Williams; Yuanyuan Xiao; Heather M Sickles; Paul Shafer; Golan Yona; Jean Y H Yang; David M Lin
Journal:  BMC Dev Biol       Date:  2007-05-16       Impact factor: 1.978

10.  Statistical analysis of differential gene expression relative to a fold change threshold on NanoString data of mouse odorant receptor genes.

Authors:  Evelien Vaes; Mona Khan; Peter Mombaerts
Journal:  BMC Bioinformatics       Date:  2014-02-04       Impact factor: 3.169

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