Literature DB >> 15304224

Twin DNA pumps of a hexameric helicase provide power to simultaneously melt two duplexes.

Daniel L Kaplan1, Mike O'Donnell.   

Abstract

DnaB is the primary replicative helicase in Escherichia coli. We show here that DnaB can unwind two duplex arms simultaneously for an extended distance provided that two protein rings are positioned on opposite sides of the duplex arms. A putative eukaryotic replication fork helicase, Mcm4,6,7, performs a similar activity. Double-ringed melting of duplexes may function at a replication fork in vivo. This mechanism may apply to RuvB, since the proteins share mechanistic similarities. Thus, two RuvB hexamers may function in coordination at a Holliday junction to overcome regions of DNA heterology and DNA lesions. Furthermore, DnaB can actively translocate along DNA while encircling three DNA strands. Therefore, if DnaB encounters a D loop during fork progression, it will encircle the invading strand and may convert the recombinative invading strand to a daughter lagging strand. Finally, we present evidence that the DNA binding site of DnaB is buried inside its central channel.

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Year:  2004        PMID: 15304224     DOI: 10.1016/j.molcel.2004.06.039

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  30 in total

1.  DNA replication: Strand separation unravelled.

Authors:  Matthew L Bochman; Anthony Schwacha
Journal:  Nature       Date:  2015-07-29       Impact factor: 49.962

2.  Analyses of the interaction between the origin binding domain from simian virus 40 T antigen and single-stranded DNA provide insights into DNA unwinding and initiation of DNA replication.

Authors:  Danielle K Reese; Gretchen Meinke; Anuradha Kumar; Stephanie Moine; Kathleen Chen; James L Sudmeier; William Bachovchin; Andrew Bohm; Peter A Bullock
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

3.  Single-molecule studies reveal dynamics of DNA unwinding by the ring-shaped T7 helicase.

Authors:  Daniel S Johnson; Lu Bai; Benjamin Y Smith; Smita S Patel; Michelle D Wang
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

4.  Replication termination mechanism as revealed by Tus-mediated polar arrest of a sliding helicase.

Authors:  Deepak Bastia; Shamsu Zzaman; Gregor Krings; Mukesh Saxena; Xiaohua Peng; Marc M Greenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-15       Impact factor: 11.205

5.  Mcm subunits can assemble into two different active unwinding complexes.

Authors:  Diane M Kanter; Irina Bruck; Daniel L Kaplan
Journal:  J Biol Chem       Date:  2008-09-17       Impact factor: 5.157

6.  Branch migration enzyme as a Brownian ratchet.

Authors:  Ivan Rasnik; Yong-Joo Jeong; Sean A McKinney; Vaishnavi Rajagopal; Smita S Patel; Taekjip Ha
Journal:  EMBO J       Date:  2008-05-29       Impact factor: 11.598

Review 7.  The Mcm complex: unwinding the mechanism of a replicative helicase.

Authors:  Matthew L Bochman; Anthony Schwacha
Journal:  Microbiol Mol Biol Rev       Date:  2009-12       Impact factor: 11.056

8.  DNA structure specificity conferred on a replicative helicase by its loader.

Authors:  Milind K Gupta; John Atkinson; Peter McGlynn
Journal:  J Biol Chem       Date:  2009-10-30       Impact factor: 5.157

9.  Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.

Authors:  Roxana Georgescu; Zuanning Yuan; Lin Bai; Ruda de Luna Almeida Santos; Jingchuan Sun; Dan Zhang; Olga Yurieva; Huilin Li; Michael E O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

10.  Model for T-antigen-dependent melting of the simian virus 40 core origin based on studies of the interaction of the beta-hairpin with DNA.

Authors:  Anuradha Kumar; Gretchen Meinke; Danielle K Reese; Stephanie Moine; Paul J Phelan; Amélie Fradet-Turcotte; Jacques Archambault; Andrew Bohm; Peter A Bullock
Journal:  J Virol       Date:  2007-02-07       Impact factor: 5.103

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