Literature DB >> 15302829

Dehydration-specific induction of hydrophilic protein genes in the anhydrobiotic nematode Aphelenchus avenae.

John A Browne1, Katharine M Dolan, Trevor Tyson, Kshamata Goyal, Alan Tunnacliffe, Ann M Burnell.   

Abstract

Some organisms can survive exposure to extreme desiccation by entering a state of suspended animation known as anhydrobiosis. The free-living nematode Aphelenchus avenae can be induced to enter the anhydrobiotic state by exposure to a moderate reduction in relative humidity. During this preconditioning period, the nematode accumulates large amounts of the disaccharide trehalose, which is thought to be necessary, but not sufficient, for successful anhydrobiosis. To identify other adaptations that are required for anhydrobiosis, we developed a novel SL1-based mRNA differential display technique to clone genes that are upregulated by dehydration in A. avenae. Three such genes, Aav-lea-1, Aav-ahn-1, and Aav-glx-1, encode, respectively, a late embryogenesis abundant (LEA) group 3 protein, a novel protein that we named anhydrin, and the antioxidant enzyme glutaredoxin. Strikingly, the predicted LEA and anhydrin proteins are highly hydrophilic and lack significant secondary structure in the hydrated state. The dehydration-induced upregulation of Aav-lea-1 and Aav-ahn-1 was confirmed by Northern hybridization and quantitative PCR experiments. Both genes were also upregulated by an osmotic upshift, but not by cold, heat, or oxidative stress. Experiments to investigate the relationship between mRNA levels and protein expression for these genes are in progress. LEA proteins occur commonly in plants, accumulating during seed maturation and desiccation stress; the presence of a gene encoding an LEA protein in an anhydrobiotic nematode suggests that some mechanisms of coping with water loss are conserved between plants and animals.

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Year:  2004        PMID: 15302829      PMCID: PMC500876          DOI: 10.1128/EC.3.4.966-975.2004

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN: 1535-9786


  48 in total

1.  Isolation and characterization of a D-7 LEA protein from pollen that stabilizes glasses in vitro.

Authors:  W F Wolkers; S McCready; W F Brandt; G G Lindsey; F A Hoekstra
Journal:  Biochim Biophys Acta       Date:  2001-01-12

2.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

3.  Anhydrobiosis without trehalose in bdelloid rotifers.

Authors:  Jens Lapinski; Alan Tunnacliffe
Journal:  FEBS Lett       Date:  2003-10-23       Impact factor: 4.124

Review 4.  POPP the question: what do LEA proteins do?

Authors:  Michael J Wise; Alan Tunnacliffe
Journal:  Trends Plant Sci       Date:  2004-01       Impact factor: 18.313

Review 5.  Anhydrobiosis.

Authors:  J H Crowe; F A Hoekstra; L M Crowe
Journal:  Annu Rev Physiol       Date:  1992       Impact factor: 19.318

6.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

7.  Characterization of a spinach gene responsive to low temperature and water stress.

Authors:  L G Neven; D W Haskell; A Hofig; Q B Li; C L Guy
Journal:  Plant Mol Biol       Date:  1993-01       Impact factor: 4.076

8.  A simple method for displaying the hydropathic character of a protein.

Authors:  J Kyte; R F Doolittle
Journal:  J Mol Biol       Date:  1982-05-05       Impact factor: 5.469

9.  Ion binding properties of the dehydrin ERD14 are dependent upon phosphorylation.

Authors:  Muath K Alsheikh; Bruce J Heyen; Stephen K Randall
Journal:  J Biol Chem       Date:  2003-08-13       Impact factor: 5.157

10.  Dehydration-induced conformational changes of poly-L-lysine as influenced by drying rate and carbohydrates.

Authors:  W F Wolkers; M G van Kilsdonk; F A Hoekstra
Journal:  Biochim Biophys Acta       Date:  1998-09-16
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  40 in total

1.  LEA proteins prevent protein aggregation due to water stress.

Authors:  Kshamata Goyal; Laura J Walton; Alan Tunnacliffe
Journal:  Biochem J       Date:  2005-05-15       Impact factor: 3.857

2.  Solution structure of a late embryogenesis abundant protein (LEA14) from Arabidopsis thaliana, a cellular stress-related protein.

Authors:  Shanteri Singh; Claudia C Cornilescu; Robert C Tyler; Gabriel Cornilescu; Marco Tonelli; Min S Lee; John L Markley
Journal:  Protein Sci       Date:  2005-09-09       Impact factor: 6.725

Review 3.  The continuing conundrum of the LEA proteins.

Authors:  Alan Tunnacliffe; Michael J Wise
Journal:  Naturwissenschaften       Date:  2007-05-04

Review 4.  The enigmatic LEA proteins and other hydrophilins.

Authors:  Marina Battaglia; Yadira Olvera-Carrillo; Alejandro Garciarrubio; Francisco Campos; Alejandra A Covarrubias
Journal:  Plant Physiol       Date:  2008-09       Impact factor: 8.340

5.  In silico evidence for the horizontal transfer of gsiB, a σ(B)-regulated gene in gram-positive bacteria, to lactic acid bacteria.

Authors:  Ioanna-Areti Asteri; Effrossyni Boutou; Rania Anastasiou; Bruno Pot; Constantinos E Vorgias; Effie Tsakalidou; Konstantinos Papadimitriou
Journal:  Appl Environ Microbiol       Date:  2011-03-18       Impact factor: 4.792

6.  Late embryogenesis abundant proteins: versatile players in the plant adaptation to water limiting environments.

Authors:  Yadira Olvera-Carrillo; José Luis Reyes; Alejandra A Covarrubias
Journal:  Plant Signal Behav       Date:  2011-04-01

7.  Hydrophilic protein associated with desiccation tolerance exhibits broad protein stabilization function.

Authors:  Sohini Chakrabortee; Chiara Boschetti; Laura J Walton; Sovan Sarkar; David C Rubinsztein; Alan Tunnacliffe
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-02       Impact factor: 11.205

8.  Downregulation of dTps1 in Drosophila melanogaster larvae confirms involvement of trehalose in redox regulation following desiccation.

Authors:  Leena Thorat; Krishna-Priya Mani; Pradeep Thangaraj; Suvro Chatterjee; Bimalendu B Nath
Journal:  Cell Stress Chaperones       Date:  2015-11-17       Impact factor: 3.667

9.  Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades.

Authors:  Frank Förster; Chunguang Liang; Alexander Shkumatov; Daniela Beisser; Julia C Engelmann; Martina Schnölzer; Marcus Frohme; Tobias Müller; Ralph O Schill; Thomas Dandekar
Journal:  BMC Genomics       Date:  2009-10-12       Impact factor: 3.969

10.  Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae.

Authors:  Wesley Reardon; Sohini Chakrabortee; Tiago Campos Pereira; Trevor Tyson; Matthew C Banton; Katharine M Dolan; Bridget A Culleton; Michael J Wise; Ann M Burnell; Alan Tunnacliffe
Journal:  BMC Mol Biol       Date:  2010-01-19       Impact factor: 2.946

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