Literature DB >> 15301545

Bidirectional catalysis by copper-containing nitrite reductase.

Hein J Wijma1, Gerard W Canters, Simon de Vries, Martin Ph Verbeet.   

Abstract

The copper-containing nitrite reductase from Alcaligenes faecalis S-6 was found to catalyze the oxidation of nitric oxide to nitrite, the reverse of its physiological reaction. Thermodynamic and kinetic constants with the physiological electron donor pseudoazurin were determined for both directions of the catalyzed reaction in the pH range of 6-8. For this, nitric oxide was monitored by a Clark-type electrode, and the redox state of pseudoazurin was measured by optical spectroscopy. The equilibrium constant (K(eq)) depends on the reduction potentials of pseudoazurin and nitrite/nitric oxide, both of which vary with pH. Above pH 6.2 the formation of NiR substrates (nitrite and reduced pseudoazurin) is favored over the products (NO and oxidized pseudoazurin). At pH 8 the K(eq) amounts to 10(3). The results show that dissimilatory nitrite reductases catalyze an unfavorable reaction at physiological pH (pH = 7-8). Consequently, nitrous oxide production by copper-containing nitrite reductases is unlikely to occur in vivo with a native electron donor. With increasing pH, the rate and specificity constant of the forward reaction decrease and become lower than the rate of the reverse reaction. The opposite occurs for the rate of the reverse reaction; thus the catalytic bias for nitrite reduction decreases. At pH 6.0 the k(cat) for nitrite reduction was determined to be 1.5 x 10(3) s(-1), and at pH 8 the rate of the reverse reaction is 125 s(-1).

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Year:  2004        PMID: 15301545     DOI: 10.1021/bi0496687

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

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Authors:  Jonathan D Caranto; Kyle M Lancaster
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

2.  The enzyme mechanism of nitrite reductase studied at single-molecule level.

Authors:  Sofya Kuznetsova; Gerhild Zauner; Thijs J Aartsma; Hans Engelkamp; Nikos Hatzakis; Alan E Rowan; Roeland J M Nolte; Peter C M Christianen; Gerard W Canters
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-26       Impact factor: 11.205

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Authors:  Sibylle Brenner; Derren J Heyes; Sam Hay; Michael A Hough; Robert R Eady; S Samar Hasnain; Nigel S Scrutton
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4.  Nitrite Reductase Activity in Engineered Azurin Variants.

Authors:  Steven M Berry; Jacob N Strange; Erika L Bladholm; Balabhadra Khatiwada; Christine G Hedstrom; Alexandra M Sauer
Journal:  Inorg Chem       Date:  2016-04-07       Impact factor: 5.165

Review 5.  Copper active sites in biology.

Authors:  Edward I Solomon; David E Heppner; Esther M Johnston; Jake W Ginsbach; Jordi Cirera; Munzarin Qayyum; Matthew T Kieber-Emmons; Christian H Kjaergaard; Ryan G Hadt; Li Tian
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Review 6.  The microbial nitrogen-cycling network.

Authors:  Marcel M M Kuypers; Hannah K Marchant; Boran Kartal
Journal:  Nat Rev Microbiol       Date:  2018-02-05       Impact factor: 60.633

7.  Directed evolution of copper nitrite reductase to a chromogenic reductant.

Authors:  Iain S MacPherson; Federico I Rosell; Melanie Scofield; A Grant Mauk; Michael E P Murphy
Journal:  Protein Eng Des Sel       Date:  2010-01-18       Impact factor: 1.650

8.  Genome-Scale, Constraint-Based Modeling of Nitrogen Oxide Fluxes during Coculture of Nitrosomonas europaea and Nitrobacter winogradskyi.

Authors:  Brett L Mellbye; Andrew T Giguere; Ganti S Murthy; Peter J Bottomley; Luis A Sayavedra-Soto; Frank W R Chaplen
Journal:  mSystems       Date:  2018-03-13       Impact factor: 6.496

9.  Low yield and abiotic origin of N2O formed by the complete nitrifier Nitrospira inopinata.

Authors:  K Dimitri Kits; Man-Young Jung; Julia Vierheilig; Petra Pjevac; Christopher J Sedlacek; Shurong Liu; Craig Herbold; Lisa Y Stein; Andreas Richter; Holger Wissel; Nicolas Brüggemann; Michael Wagner; Holger Daims
Journal:  Nat Commun       Date:  2019-04-23       Impact factor: 14.919

10.  Comparative Proteomics of Three Species of Ammonia-Oxidizing Bacteria.

Authors:  Jackie K Zorz; Jessica A Kozlowski; Lisa Y Stein; Marc Strous; Manuel Kleiner
Journal:  Front Microbiol       Date:  2018-05-14       Impact factor: 5.640

  10 in total

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