Literature DB >> 15299729

Structure of fasciculin 2 from green mamba snake venom: evidence for unusual loop flexibility.

M H le Du1, D Housset, P Marchot, P E Bougis, J Navaza, J C Fontecilla-Camps.   

Abstract

The crystal structure of the snake toxin fasciculin 2, a potent acetylcholinesterase inhibitor from the venom of the green mamba (Dendroaspis angusticeps), has been determined by the molecular-replacement method, using the fasciculin 1 model and refined to 2.0 A resolution. The introduction of an overall anisotropic temperature factor improved significantly the quality of the electron-density map. It suggests, as it was also indicated by the packing, that the thermal motion along the unique axis direction is less pronounced than on the (ab) plane. The final crystallographic R factor is 0.188 for a model having r.m.s. deviations from ideality of 0.016 A for bond lengths and 2.01 degrees for bond angles. As fasciculin 1, fasciculin 2 belongs to the three-finger class of Elapidae toxins, a structural group that also contains the alpha-neurotoxins and the cardiotoxins. Although the two fasciculins have, overall, closely related structures, the conformation of loop I differs appreciably in the two molecules. The presence of detergent in crystallization medium in the case of fasciculin 2 appears to be responsible for the displacement of the loop containing Thr9. This conformational change also results in the formation of a crystallographic dimer that displays extensive intermolecular interactions.

Entities:  

Year:  1996        PMID: 15299729     DOI: 10.1107/S0907444995007517

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  8 in total

1.  Electrostatics in protein-protein docking.

Authors:  Alexander Heifetz; Ephraim Katchalski-Katzir; Miriam Eisenstein
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

2.  Conformational transitions in protein-protein association: binding of fasciculin-2 to acetylcholinesterase.

Authors:  Jennifer M Bui; Zoran Radic; Palmer Taylor; J Andrew McCammon
Journal:  Biophys J       Date:  2006-02-10       Impact factor: 4.033

3.  Mapping conformational dynamics of proteins using torsional dynamics simulations.

Authors:  Vamshi K Gangupomu; Jeffrey R Wagner; In-Hee Park; Abhinandan Jain; Nagarajan Vaidehi
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

4.  Crystal structure of a Cbtx-AChBP complex reveals essential interactions between snake alpha-neurotoxins and nicotinic receptors.

Authors:  Yves Bourne; Todd T Talley; Scott B Hansen; Palmer Taylor; Pascale Marchot
Journal:  EMBO J       Date:  2005-03-24       Impact factor: 11.598

5.  Interaction of synthetic peptides from fasciculin with acetylcholinesterase.

Authors:  R J Falkenstein; C Peña
Journal:  J Protein Chem       Date:  1999-02

6.  Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles.

Authors:  Sidhartha Chaudhury; Jeffrey J Gray
Journal:  J Mol Biol       Date:  2008-05-24       Impact factor: 5.469

7.  Identification and structural characterization of a new three-finger toxin hemachatoxin from Hemachatus haemachatus venom.

Authors:  Vallerinteavide Mavelli Girish; Sundramurthy Kumar; Lissa Joseph; Chacko Jobichen; R Manjunatha Kini; J Sivaraman
Journal:  PLoS One       Date:  2012-10-29       Impact factor: 3.240

8.  Nature: a substantial source of auspicious substances with acetylcholinesterase inhibitory action.

Authors:  Ilkay Erdogan Orhan
Journal:  Curr Neuropharmacol       Date:  2013-07       Impact factor: 7.363

  8 in total

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