Literature DB >> 15299630

RNA - synthesis, purification and crystallization.

M C Wahl1, B Ramakrishnan, C Ban, X Chen, M Sundaralingam.   

Abstract

Protocols for the routine chemical synthesis and purification of milligram quantities of RNA and DNA-RNA chimeras meeting the demands of X-ray crystallography are described. An efficient screening protocol to test the crystallizability of the molecules and the optimization of the crystallization conditions are presented, so as to allow reproduction by others. Essentially the same crystallization conditions as for DNA oligomers can be employed for RNA crystallization. Specific examples involving alternating octamers, G/C-rich decamers, sequences with overhangs, and drug complexes of chimeras are discussed. Success of the methods is attested by the crystals obtained which diffract to high resolution.

Year:  1996        PMID: 15299630     DOI: 10.1107/S0907444996002788

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  5 in total

1.  B-form to A-form conversion by a 3'-terminal ribose: crystal structure of the chimera d(CCACTAGTG)r(G).

Authors:  M C Wahl; M Sundaralingam
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

2.  Visualization of RNA crystal growth by atomic force microscopy.

Authors:  J D Ng; Y G Kuznetsov; A J Malkin; G Keith; R Giegé; A McPherson
Journal:  Nucleic Acids Res       Date:  1997-07-01       Impact factor: 16.971

3.  Structural insights into the effects of 2'-5' linkages on the RNA duplex.

Authors:  Jia Sheng; Li Li; Aaron E Engelhart; Jianhua Gan; Jiawei Wang; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-10       Impact factor: 11.205

4.  Synthesis, Purification and Crystallization of Guanine-rich RNA Oligonucleotides.

Authors:  Baocheng Pan; Ke Shi; Muttaiya Sundaralingam
Journal:  Biol Proced Online       Date:  2004-11-22       Impact factor: 3.244

5.  Structural insights of non-canonical U*U pair and Hoogsteen interaction probed with Se atom.

Authors:  Jia Sheng; Jianhua Gan; Alexei S Soares; Jozef Salon; Zhen Huang
Journal:  Nucleic Acids Res       Date:  2013-09-05       Impact factor: 16.971

  5 in total

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