Literature DB >> 15299526

2.0 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with a peptide inhibitor and detergent.

D R Knighton1, S M Bell, J Zheng, L F Ten Eyck, N H Xuong, S S Taylor, J M Sowadski.   

Abstract

. A mutant (Serl39Ala) of the mouse recombinant catalytic (C) subunit of cAMP-dependent protein kinase was co-crystallized with a peptide inhibitor, PKI(5-24), and MEGA-8 (octanoyl-N-methylglucamide) detergent. This structure was refined using all observed data (30 248 reflections) between 30 and 1.95 A resolution to an R factor of 0.186. R.m.s. deviations of bond lengths and bond angles are 0.013 A and 2.3 degrees, respectively. The final model has 3075 atoms (207 solvent) with a mean B factor of 31.9 A(2). The placement of invariant protein-kinase residues and most C:PKI(5-24) interactions were confirmed, but register errors affecting residues 55-64 and 309-339 were corrected during refinement by shifting the affected sequences toward the C terminus along the previously determined backbone path. New details of C:PKI(5-24) interactions and the Ser338 autophosphorylation site are described, and the acyl group binding site near the catalytic subunit NH(2) terminus is identified.

Entities:  

Year:  1993        PMID: 15299526     DOI: 10.1107/S0907444993000502

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  20 in total

1.  Molecular mimicry of substrate oxygen atoms by water molecules in the beta-amylase active site.

Authors:  G Pujadas; J Palau
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725

2.  Ligand-induced global transitions in the catalytic domain of protein kinase A.

Authors:  Changbong Hyeon; Patricia A Jennings; Joseph A Adams; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-09       Impact factor: 11.205

3.  Conserved water molecules contribute to the extensive network of interactions at the active site of protein kinase A.

Authors:  S Shaltiel; S Cox; S S Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-20       Impact factor: 11.205

4.  A novel role for protein kinase Kin2 in regulating HAC1 mRNA translocation, splicing, and translation.

Authors:  Ashish Anshu; M Amin-Ul Mannan; Abhijit Chakraborty; Saikat Chakrabarti; Madhusudan Dey
Journal:  Mol Cell Biol       Date:  2014-10-27       Impact factor: 4.272

5.  Crystal structure of the E230Q mutant of cAMP-dependent protein kinase reveals an unexpected apoenzyme conformation and an extended N-terminal A helix.

Authors:  Jian Wu; Jie Yang; Natarajan Kannan; Nguyen-Huu Xuong; Lynn F Ten Eyck; Susan S Taylor
Journal:  Protein Sci       Date:  2005-11       Impact factor: 6.725

Review 6.  Detergent binding to unmyristylated protein kinase A--structural implications for the role of myristate.

Authors:  J M Sowadski; C A Ellis
Journal:  J Bioenerg Biomembr       Date:  1996-02       Impact factor: 2.945

7.  Structural basis for chromosome X-linked agammaglobulinemia: a tyrosine kinase disease.

Authors:  M Vihinen; D Vetrie; H S Maniar; H D Ochs; Q Zhu; I Vorechovský; A D Webster; L D Notarangelo; L Nilsson; J M Sowadski
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

8.  A conserved helix motif complements the protein kinase core.

Authors:  M Veron; E Radzio-Andzelm; I Tsigelny; L F Ten Eyck; S S Taylor
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-15       Impact factor: 11.205

9.  A three-dimensional model of the Cdc2 protein kinase: localization of cyclin- and Suc1-binding regions and phosphorylation sites.

Authors:  M J Marcote; D R Knighton; G Basi; J M Sowadski; P Brambilla; G Draetta; S S Taylor
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

10.  Crystal structure of the kinase domain of serum and glucocorticoid-regulated kinase 1 in complex with AMP PNP.

Authors:  Baoguang Zhao; Ruth Lehr; Angela M Smallwood; Thau F Ho; Kathleen Maley; Tanya Randall; Martha S Head; Kristin K Koretke; Christine G Schnackenberg
Journal:  Protein Sci       Date:  2007-10-26       Impact factor: 6.725

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