Literature DB >> 15285677

Application of a universal force field to mixed Fe/Mo-S/Se cubane and heterocubane clusters. 1. Substitution of sulfur by selenium in the series [Fe4X4(YCH3)4]2-; X = S/Se and Y = S/Se.

Axel Kern1, Christian Näther, Felix Studt, Felix Tuczek.   

Abstract

A series of Fe-S and Fe-Se cubane clusters containing all four combinations of the general formula [Fe(4)X(4)(Y-CH(3))(4)](2)(-) (X = S/Se, Y = S/Se) is investigated with FTIR and Raman spectroscopy. The terminally selenolate coordinated clusters (Y = Se) are prepared by a new synthetic route. All four cluster compounds are structurally characterized by X-ray single-crystal structure determination. Infrared and Raman spectra of all compounds are presented and interpreted with normal coordinate analysis. The corresponding force fields are based on that developed for the Fe(4)S(4)-benzyl cluster (Czernuszewicz, R. S.; Macor, K. A.; Johnson, M. K.; Gewirth, A.; Spiro, T. G. J. Am.Chem. Soc. 1987, 109, 7178-7187). An empirical procedure is presented to convert Fe-S into Fe-Se force constants. Only minor changes in force constants are found upon S --> Se exchange, reflecting the similarity of the Fe-S and Fe-Se bonds. The drastic frequency shifts in the metal-ligand region observed upon substitution of sulfur by selenium are, therefore, primarily due to the corresponding mass changes.

Entities:  

Year:  2004        PMID: 15285677     DOI: 10.1021/ic030347d

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  5 in total

1.  How nitrogenase shakes--initial information about P-cluster and FeMo-cofactor normal modes from nuclear resonance vibrational spectroscopy (NRVS).

Authors:  Yuming Xiao; Karl Fisher; Matt C Smith; William E Newton; David A Case; Simon J George; Hongxin Wang; Wolfgang Sturhahn; Ercan E Alp; Jiyong Zhao; Yoshitaka Yoda; Stephen P Cramer
Journal:  J Am Chem Soc       Date:  2006-06-14       Impact factor: 15.419

2.  Specific incorporation of chalcogenide bridge atoms in molybdenum/tungsten-iron-sulfur single cubane clusters.

Authors:  Amit Majumdar; R H Holm
Journal:  Inorg Chem       Date:  2011-10-10       Impact factor: 5.165

3.  Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus D14C ferredoxin via nuclear resonance vibrational and resonance Raman spectroscopies, force field simulations, and density functional theory calculations.

Authors:  Devrani Mitra; Vladimir Pelmenschikov; Yisong Guo; David A Case; Hongxin Wang; Weibing Dong; Ming-Liang Tan; Toshiko Ichiye; Francis E Jenney; Michael W W Adams; Yoshitaka Yoda; Jiyong Zhao; Stephen P Cramer
Journal:  Biochemistry       Date:  2011-05-18       Impact factor: 3.162

4.  Characterization of a Nitrogenase Iron Protein Substituted with a Synthetic [Fe4 Se4 ] Cluster.

Authors:  Joseph B Solomon; Kazuki Tanifuji; Chi Chung Lee; Andrew J Jasniewski; Britt Hedman; Keith O Hodgson; Yilin Hu; Markus W Ribbe
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-10       Impact factor: 16.823

5.  Characterization of [4Fe-4S] cluster vibrations and structure in nitrogenase Fe protein at three oxidation levels via combined NRVS, EXAFS, and DFT analyses.

Authors:  Devrani Mitra; Simon J George; Yisong Guo; Saeed Kamali; Stephen Keable; John W Peters; Vladimir Pelmenschikov; David A Case; Stephen P Cramer
Journal:  J Am Chem Soc       Date:  2013-02-11       Impact factor: 15.419

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.