Literature DB >> 15283918

Methods to study protein dynamics and folding by mass spectrometry.

Stephen J Eyles1, Igor A Kaltashov.   

Abstract

It is clear that merely knowing the structure of a protein alone is not sufficient to fully understand its behavior: knowledge also of the dynamic events that occur within proteins is vital to elucidate their function and folding. In recent years, mass spectrometry has come to the forefront as a powerful biophysical method, which can shed light both on the structure and dynamics of proteins. Hydrogen exchange monitored by mass spectrometry is a highly sensitive marker of the backbone dynamics in solution that, combined with gas phase dissociation techniques, can provide a high resolution tool to locate the dynamic regions of a protein. Additionally, charge state distributions in electrospray mass spectra yield insight into the nature and population of alternate structural states present at equilibrium. In this paper, we describe several applications of these methodologies to probe the dynamic events key to the structure, folding, and biological functions of proteins.

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Year:  2004        PMID: 15283918     DOI: 10.1016/j.ymeth.2004.03.015

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  37 in total

1.  The role of conformation on electron capture dissociation of ubiquitin.

Authors:  Errol W Robinson; Ryan D Leib; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2006-08-04       Impact factor: 3.109

2.  A triaxial probe for on-line proteolysis coupled with hydrogen/deuterium exchange-electrospray mass spectrometry.

Authors:  Maolian Chen; Kelsey D Cook; Indu Kheterpal; Ronald Wetzel
Journal:  J Am Soc Mass Spectrom       Date:  2006-10-30       Impact factor: 3.109

3.  Scope and utility of hydrogen exchange as a tool for mapping landscapes.

Authors:  Sheila S Jaswal; Andrew D Miranker
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

4.  Electrospray ionization mass spectra of acyl carrier protein are insensitive to its solution phase conformation.

Authors:  Peter W Murphy; Elden E Rowland; David M Byers
Journal:  J Am Soc Mass Spectrom       Date:  2007-05-24       Impact factor: 3.109

5.  Mass spectrometry analysis of HIV-1 Vif reveals an increase in ordered structure upon oligomerization in regions necessary for viral infectivity.

Authors:  Jared R Auclair; Karin M Green; Shivender Shandilya; James E Evans; Mohan Somasundaran; Celia A Schiffer
Journal:  Proteins       Date:  2007-11-01

6.  Analysis of protein mixtures by electrospray mass spectrometry: effects of conformation and desolvation behavior on the signal intensities of hemoglobin subunits.

Authors:  Mark C Kuprowski; Brian L Boys; Lars Konermann
Journal:  J Am Soc Mass Spectrom       Date:  2007-04-15       Impact factor: 3.109

Review 7.  Protein folding and misfolding: mechanism and principles.

Authors:  S Walter Englander; Leland Mayne; Mallela M G Krishna
Journal:  Q Rev Biophys       Date:  2008-04-14       Impact factor: 5.318

8.  Dynamic structural changes during complement C3 activation analyzed by hydrogen/deuterium exchange mass spectrometry.

Authors:  Michael C Schuster; Daniel Ricklin; Krisztián Papp; Kathleen S Molnar; Stephen J Coales; Yoshitomo Hamuro; Georgia Sfyroera; Hui Chen; Michael S Winters; John D Lambris
Journal:  Mol Immunol       Date:  2008-05-05       Impact factor: 4.407

9.  Conformation and dynamics of biopharmaceuticals: transition of mass spectrometry-based tools from academe to industry.

Authors:  Igor A Kaltashov; Cedric E Bobst; Rinat R Abzalimov; Steven A Berkowitz; Damian Houde
Journal:  J Am Soc Mass Spectrom       Date:  2009-10-29       Impact factor: 3.109

10.  Controlling hydrogen scrambling in multiply charged protein ions during collisional activation: implications for top-down hydrogen/deuterium exchange MS utilizing collisional activation in the gas phase.

Authors:  Rinat R Abzalimov; Igor A Kaltashov
Journal:  Anal Chem       Date:  2010-02-01       Impact factor: 6.986

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