Literature DB >> 15282292

Efficient and error-free replication past a minor-groove N2-guanine adduct by the sequential action of yeast Rev1 and DNA polymerase zeta.

M Todd Washington1, Irina G Minko, Robert E Johnson, Lajos Haracska, Thomas M Harris, R Stephen Lloyd, Satya Prakash, Louise Prakash.   

Abstract

Rev1, a member of the Y family of DNA polymerases, functions in lesion bypass together with DNA polymerase zeta (Pol zeta). Rev1 is a highly specialized enzyme in that it incorporates only a C opposite template G. While Rev1 plays an indispensable structural role in Pol zeta-dependent lesion bypass, the role of its DNA synthetic activity in lesion bypass has remained unclear. Since interactions of DNA polymerases with the DNA minor groove contribute to the nearly equivalent efficiencies and fidelities of nucleotide incorporation opposite each of the four template bases, here we examine the possibility that unlike other DNA polymerases, Rev1 does not come into close contact with the minor groove of the incipient base pair, and that enables it to incorporate a C opposite the N(2)-adducted guanines in DNA. To test this idea, we examined whether Rev1 could incorporate a C opposite the gamma-hydroxy-1,N(2)-propano-2'deoxyguanosine DNA minor-groove adduct, which is formed from the reaction of acrolein with the N(2) of guanine. Acrolein, an alpha,beta-unsaturated aldehyde, is generated in vivo as the end product of lipid peroxidation and from other oxidation reactions. We show here that Rev1 efficiently incorporates a C opposite this adduct from which Pol zeta subsequently extends, thereby completing the lesion bypass reaction. Based upon these observations, we suggest that an important role of the Rev1 DNA synthetic activity in lesion bypass is to incorporate a C opposite the various N(2)-guanine DNA minor-groove adducts that form in DNA.

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Year:  2004        PMID: 15282292      PMCID: PMC479736          DOI: 10.1128/MCB.24.16.6900-6906.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  40 in total

1.  Lipid peroxidation as a potential endogenous source for the formation of exocyclic DNA adducts.

Authors:  F L Chung; H J Chen; R G Nath
Journal:  Carcinogenesis       Date:  1996-10       Impact factor: 4.944

2.  Detection of exocyclic 1,N2-propanodeoxyguanosine adducts as common DNA lesions in rodents and humans.

Authors:  R G Nath; F L Chung
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-02       Impact factor: 11.205

3.  The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta.

Authors:  C Masutani; R Kusumoto; A Yamada; N Dohmae; M Yokoi; M Yuasa; M Araki; S Iwai; K Takio; F Hanaoka
Journal:  Nature       Date:  1999-06-17       Impact factor: 49.962

4.  Deoxycytidyl transferase activity of yeast REV1 protein.

Authors:  J R Nelson; C W Lawrence; D C Hinkle
Journal:  Nature       Date:  1996-08-22       Impact factor: 49.962

Review 5.  DNA polymerase zeta and the control of DNA damage induced mutagenesis in eukaryotes.

Authors:  C W Lawrence; D C Hinkle
Journal:  Cancer Surv       Date:  1996

Review 6.  Endogenous formation and significance of 1,N2-propanodeoxyguanosine adducts.

Authors:  F L Chung; R G Nath; M Nagao; A Nishikawa; G D Zhou; K Randerath
Journal:  Mutat Res       Date:  1999-03-08       Impact factor: 2.433

7.  Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Poleta.

Authors:  R E Johnson; S Prakash; L Prakash
Journal:  Science       Date:  1999-02-12       Impact factor: 47.728

8.  Identification of APN2, the Saccharomyces cerevisiae homolog of the major human AP endonuclease HAP1, and its role in the repair of abasic sites.

Authors:  R E Johnson; C A Torres-Ramos; T Izumi; S Mitra; S Prakash; L Prakash
Journal:  Genes Dev       Date:  1998-10-01       Impact factor: 11.361

9.  Detection of 1, N2-propanodeoxyguanosine adducts as potential endogenous DNA lesions in rodent and human tissues.

Authors:  R G Nath; J E Ocando; F L Chung
Journal:  Cancer Res       Date:  1996-02-01       Impact factor: 12.701

10.  Reaffirmation that metabolism of polyamines by bovine plasma amine oxidase occurs strictly at the primary amino termini.

Authors:  Y Lee; L M Sayre
Journal:  J Biol Chem       Date:  1998-07-31       Impact factor: 5.157

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  53 in total

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Authors:  Plamen P Christov; Kinrin Yamanaka; Jeong-Yun Choi; Kei-ichi Takata; Richard D Wood; F Peter Guengerich; R Stephen Lloyd; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2012-07-06       Impact factor: 3.739

Review 2.  Eukaryotic translesion polymerases and their roles and regulation in DNA damage tolerance.

Authors:  Lauren S Waters; Brenda K Minesinger; Mary Ellen Wiltrout; Sanjay D'Souza; Rachel V Woodruff; Graham C Walker
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

3.  Separate domains of Rev1 mediate two modes of DNA damage bypass in mammalian cells.

Authors:  Jacob G Jansen; Anastasia Tsaalbi-Shtylik; Giel Hendriks; Himabindu Gali; Ayal Hendel; Fredrik Johansson; Klaus Erixon; Zvi Livneh; Leon H F Mullenders; Lajos Haracska; Niels de Wind
Journal:  Mol Cell Biol       Date:  2009-03-30       Impact factor: 4.272

4.  Effects of Twelve Germline Missense Variations on DNA Lesion and G-Quadruplex Bypass Activities of Human DNA Polymerase REV1.

Authors:  Mina Yeom; In-Hyeok Kim; Jae-Kwon Kim; KyeongJin Kang; Robert L Eoff; F Peter Guengerich; Jeong-Yun Choi
Journal:  Chem Res Toxicol       Date:  2016-03-04       Impact factor: 3.739

5.  Kinetic analysis of translesion synthesis opposite bulky N2- and O6-alkylguanine DNA adducts by human DNA polymerase REV1.

Authors:  Jeong-Yun Choi; F Peter Guengerich
Journal:  J Biol Chem       Date:  2008-06-30       Impact factor: 5.157

6.  Mutagenicity of N3-methyladenine: a multi-translesion polymerase affair.

Authors:  Paola Monti; Ilaria Traverso; Laura Casolari; Paola Menichini; Alberto Inga; Laura Ottaggio; Debora Russo; Prema Iyer; Barry Gold; Gilberto Fronza
Journal:  Mutat Res       Date:  2010-01-05       Impact factor: 2.433

7.  The Proliferating Cell Nuclear Antigen (PCNA)-interacting Protein (PIP) Motif of DNA Polymerase η Mediates Its Interaction with the C-terminal Domain of Rev1.

Authors:  Elizabeth M Boehm; Kyle T Powers; Christine M Kondratick; Maria Spies; Jon C D Houtman; M Todd Washington
Journal:  J Biol Chem       Date:  2016-02-22       Impact factor: 5.157

8.  Complex formation of yeast Rev1 with DNA polymerase eta.

Authors:  Narottam Acharya; Lajos Haracska; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2007-09-17       Impact factor: 4.272

9.  Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV.

Authors:  Yazhen Wang; Sarah K Musser; Sam Saleh; Lawrence J Marnett; Martin Egli; Michael P Stone
Journal:  Biochemistry       Date:  2008-06-19       Impact factor: 3.162

10.  Structure and functional analysis of the BRCT domain of translesion synthesis DNA polymerase Rev1.

Authors:  John M Pryor; Lokesh Gakhar; M Todd Washington
Journal:  Biochemistry       Date:  2012-12-20       Impact factor: 3.162

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