Literature DB >> 15282167

Identification of evolutionarily conserved promoter elements and amino acids required for function of the C. elegans beta-catenin homolog BAR-1.

L Natarajan1, B M Jackson, E Szyleyko, D M Eisenmann.   

Abstract

beta-catenins are conserved transcription factors regulated posttranslationally by Wnt signaling. bar-1 encodes a Caenorhabditis elegans beta-catenin acting in multiple Wnt-mediated processes, including cell fate specification by vulval precursor cells (VPCs) and migration of the Q(L) neuroblast progeny. We took two approaches to extend our knowledge of bar-1 function. First, we undertook a bar-1 promoter analysis using transcriptional GFP reporter fusions and found that bar-1 expression is regulated in specific cells at the transcriptional level. We identified promoter elements necessary for bar-1 expression in several cell types, including a 321-bp element sufficient for expression in ventral cord neurons (VCNs) and a 1.1-kb element sufficient for expression in the developing vulva and adult seam cells. Expression of bar-1 from the 321-bp element rescued the Uncoordinated (Unc) phenotype of bar-1 mutants, but not the vulval phenotype, suggesting that a Wnt pathway may act in ventral cord neurons to mediate proper locomotion. By comparison of the 1.1-kb element to homologous sequences from Caenorhabditis briggsae, we identified evolutionarily conserved sequences necessary for expression in vulval or seam cells. Second, we analyzed 24 mutations in bar-1 and identified several residues required for BAR-1 activity in C. elegans. By phylogenetic comparison, we found that most of these residues are conserved and may identify amino acids necessary for beta-catenin function in all species.

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Year:  2004        PMID: 15282167     DOI: 10.1016/j.ydbio.2004.05.027

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  14 in total

1.  Genetic barcoding with fluorescent proteins for multiplexed applications.

Authors:  Cameron A Smurthwaite; Wesley Williams; Alexandra Fetsko; Darin Abbadessa; Zachary D Stolp; Connor W Reed; Andre Dharmawan; Roland Wolkowicz
Journal:  J Vis Exp       Date:  2015-04-14       Impact factor: 1.355

2.  A C. elegans Myc-like network cooperates with semaphorin and Wnt signaling pathways to control cell migration.

Authors:  Christopher L Pickett; Kevin T Breen; Donald E Ayer
Journal:  Dev Biol       Date:  2007-08-03       Impact factor: 3.582

3.  The Wnt pathway controls cell death engulfment, spindle orientation, and migration through CED-10/Rac.

Authors:  Juan Cabello; Lukas J Neukomm; Ufuk Günesdogan; Katharina Burkart; Steve J Charette; Günter Lochnit; Michael O Hengartner; Ralf Schnabel
Journal:  PLoS Biol       Date:  2010-02-02       Impact factor: 8.029

4.  C. elegans GATA factors EGL-18 and ELT-6 function downstream of Wnt signaling to maintain the progenitor fate during larval asymmetric divisions of the seam cells.

Authors:  Lakshmi Gorrepati; Kenneth W Thompson; David M Eisenmann
Journal:  Development       Date:  2013-05       Impact factor: 6.868

5.  Caenorhabditis elegans ABCRNAi transporters interact genetically with rde-2 and mut-7.

Authors:  Prema Sundaram; Wang Han; Nancy Cohen; Benjamin Echalier; John Albin; Lisa Timmons
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

6.  NemaFootPrinter: a web based software for the identification of conserved non-coding genome sequence regions between C. elegans and C. briggsae.

Authors:  Davide Rambaldi; Alessandro Guffanti; Paolo Morandi; Giuseppe Cassata
Journal:  BMC Bioinformatics       Date:  2005-12-01       Impact factor: 3.169

7.  Identification of Wnt Pathway Target Genes Regulating the Division and Differentiation of Larval Seam Cells and Vulval Precursor Cells in Caenorhabditis elegans.

Authors:  Lakshmi Gorrepati; Michael W Krause; Weiping Chen; Thomas M Brodigan; Margarita Correa-Mendez; David M Eisenmann
Journal:  G3 (Bethesda)       Date:  2015-06-05       Impact factor: 3.154

8.  Use of an activated beta-catenin to identify Wnt pathway target genes in caenorhabditis elegans, including a subset of collagen genes expressed in late larval development.

Authors:  Belinda M Jackson; Patricia Abete-Luzi; Michael W Krause; David M Eisenmann
Journal:  G3 (Bethesda)       Date:  2014-04-16       Impact factor: 3.154

9.  A beta-catenin-dependent Wnt pathway mediates anteroposterior axon guidance in C. elegans motor neurons.

Authors:  Géraldine S Maro; Matthew P Klassen; Kang Shen
Journal:  PLoS One       Date:  2009-03-04       Impact factor: 3.240

10.  Cell-cycle regulation of NOTCH signaling during C. elegans vulval development.

Authors:  Stefanie Nusser-Stein; Antje Beyer; Ivo Rimann; Magdalene Adamczyk; Nir Piterman; Alex Hajnal; Jasmin Fisher
Journal:  Mol Syst Biol       Date:  2012       Impact factor: 11.429

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