Literature DB >> 15280041

Identification of the catalytic residues in the double-zinc aminopeptidase from Streptomyces griseus.

Yifat Fundoiano-Hershcovitz1, Larisa Rabinovitch, Yael Langut, Vera Reiland, Gil Shoham, Yuval Shoham.   

Abstract

The aminopeptidase from Streptomyces griseus (SGAP) has been cloned and expressed in Escherichia coli. By growing the cells in the presence of 1 M sorbitol at 18 degrees C, the protein was obtained in a soluble and active form. The amino acid sequence of the recombinant SGAP contained four amino acids differing from the previously published sequence. Re-sequencing of the native protein indicated that asparagines 70 and 184 are in fact aspartic acids as in the recombinant protein. Based on the crystal structure of SGAP, Glu131 and Tyr246 were proposed to be the catalytic residues. Replacements of Glu131 resulted in loss of activity of 4-5 orders of magnitude, consistent with Glu131 acting as the general base residue. Mutations in Tyr246 resulted in about 100-fold reduction of activity, suggesting that this residue is involved in the stabilization of the transition state intermediate.

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Year:  2004        PMID: 15280041     DOI: 10.1016/j.febslet.2004.07.001

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  11 in total

1.  Dipeptide synthesis by an aminopeptidase from Streptomyces septatus TH-2 and its application to synthesis of biologically active peptides.

Authors:  Jiro Arima; Yoshiko Uesugi; Misugi Uraji; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

2.  Change in substrate preference of Streptomyces aminopeptidase through modification of the environment around the substrate binding site.

Authors:  Jiro Arima; Yoshiko Uesugi; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2006-10-06       Impact factor: 4.792

3.  Crystal structures of human glutaminyl cyclase, an enzyme responsible for protein N-terminal pyroglutamate formation.

Authors:  Kai-Fa Huang; Yi-Liang Liu; Wei-Ju Cheng; Tzu-Ping Ko; Andrew H-J Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-31       Impact factor: 11.205

4.  Alteration of leucine aminopeptidase from Streptomyces septatus TH-2 to phenylalanine aminopeptidase by site-directed mutagenesis.

Authors:  Jiro Arima; Yoshiko Uesugi; Masaki Iwabuchi; Tadashi Hatanaka
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

5.  The calcium-binding site of human glutamate carboxypeptidase II is critical for dimerization, thermal stability, and enzymatic activity.

Authors:  Jakub Ptacek; Jana Nedvedova; Michal Navratil; Barbora Havlinova; Jan Konvalinka; Cyril Barinka
Journal:  Protein Sci       Date:  2018-09       Impact factor: 6.725

6.  Reaction mechanism of glutamate carboxypeptidase II revealed by mutagenesis, X-ray crystallography, and computational methods.

Authors:  Vojtech Klusák; Cyril Barinka; Anna Plechanovová; Petra Mlcochová; Jan Konvalinka; Lubomír Rulísek; Jacek Lubkowski
Journal:  Biochemistry       Date:  2009-05-19       Impact factor: 3.162

7.  Structure-based approach to alter the substrate specificity of Bacillus subtilis aminopeptidase.

Authors:  Xinxing Gao; Wenjing Cui; Ning Ding; Zhongmei Liu; Yaping Tian; Zhemin Zhou
Journal:  Prion       Date:  2013-05-31       Impact factor: 3.931

8.  Enhanced thermal stability and hydrolytic ability of Bacillus subtilis aminopeptidase by removing the thermal sensitive domain in the non-catalytic region.

Authors:  Xinxing Gao; Zhongmei Liu; Wenjing Cui; Li Zhou; Yaping Tian; Zhemin Zhou
Journal:  PLoS One       Date:  2014-03-14       Impact factor: 3.240

9.  Draft Genome Sequence of Lysinibacillus sp. Strain A1, Isolated from Malaysian Tropical Soil.

Authors:  Kok-Gan Chan; Jian Woon Chen; Chien-Yi Chang; Wai-Fong Yin; Xin-Yue Chan
Journal:  Genome Announc       Date:  2015-03-26

10.  A novel virulence strategy for Pseudomonas aeruginosa mediated by an autotransporter with arginine-specific aminopeptidase activity.

Authors:  Jeni C A Luckett; Owen Darch; Chase Watters; Manal Abuoun; Victoria Wright; Esteban Paredes-Osses; Jenny Ward; Hana Goto; Stephan Heeb; Stéphanie Pommier; Kendra P Rumbaugh; Miguel Cámara; Kim R Hardie
Journal:  PLoS Pathog       Date:  2012-08-23       Impact factor: 6.823

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