Literature DB >> 15277747

Cloning and characterization of the genes encoding enzymes for the protocatechuate meta-degradation pathway of Pseudomonas ochraceae NGJ1.

Kiyofumi Maruyama1, Tomohiko Shibayama, Aki Ichikawa, Yukari Sakou, Satsue Yamada, Hiroyuki Sugisaki.   

Abstract

The 2-pyrone-4,6-dicarboxylate lactonase gene (proL), the protocatechuate 4,5-dioxygenase alpha and beta subunits genes (proOa and proOb), and the 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase gene (proD) were cloned from the chromosomal DNA of Pseudomonas ochraceae NGJ1. These genes were in the order proLOaObD on the DNA, and a possible transcription terminator sequence followed. The proL and proD genes were over-expressed in Escherichia coli, and their gene products were purified for identification, while the expression of proOaOb was at a lower level. The protocatechuate meta-degradation operon was reconstituted with the recombinant plasmids and expressed successfully in E. coli.

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Year:  2004        PMID: 15277747     DOI: 10.1271/bbb.68.1434

Source DB:  PubMed          Journal:  Biosci Biotechnol Biochem        ISSN: 0916-8451            Impact factor:   2.043


  14 in total

1.  Construction and Optimization of a Heterologous Pathway for Protocatechuate Catabolism in Escherichia coli Enables Bioconversion of Model Aromatic Compounds.

Authors:  Sonya M Clarkson; Richard J Giannone; Donna M Kridelbaugh; James G Elkins; Adam M Guss; Joshua K Michener
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

2.  Oxidative opening of the aromatic ring: Tracing the natural history of a large superfamily of dioxygenase domains and their relatives.

Authors:  A Maxwell Burroughs; Margaret E Glasner; Kevin P Barry; Erika A Taylor; L Aravind
Journal:  J Biol Chem       Date:  2019-05-15       Impact factor: 5.157

3.  The role of a periplasmic gluconolactonase (PpgL)-like protein in Pseudomonas syringae pv. syringae B728a.

Authors:  Saeed Tarighi; Parissa Taheri
Journal:  World J Microbiol Biotechnol       Date:  2010-10-09       Impact factor: 3.312

4.  Characterization of the gallate dioxygenase gene: three distinct ring cleavage dioxygenases are involved in syringate degradation by Sphingomonas paucimobilis SYK-6.

Authors:  Daisuke Kasai; Eiji Masai; Keisuke Miyauchi; Yoshihiro Katayama; Masao Fukuda
Journal:  J Bacteriol       Date:  2005-08       Impact factor: 3.490

5.  Uncovering the protocatechuate 2,3-cleavage pathway genes.

Authors:  Daisuke Kasai; Toshihiro Fujinami; Tomokuni Abe; Kohei Mase; Yoshihiro Katayama; Masao Fukuda; Eiji Masai
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

6.  4-sulfomuconolactone hydrolases from Hydrogenophaga intermedia S1 and Agrobacterium radiobacter S2.

Authors:  Sad Halak; Tamara Basta; Sibylle Bürger; Matthias Contzen; Victor Wray; Dietmar Helmut Pieper; Andreas Stolz
Journal:  J Bacteriol       Date:  2007-07-27       Impact factor: 3.490

7.  Bacterial degradation of phthalate isomers and their esters.

Authors:  C Vamsee-Krishna; Prashant S Phale
Journal:  Indian J Microbiol       Date:  2008-05-01       Impact factor: 2.461

8.  Characterizing the promiscuity of LigAB, a lignin catabolite degrading extradiol dioxygenase from Sphingomonas paucimobilis SYK-6.

Authors:  Kevin P Barry; Erika A Taylor
Journal:  Biochemistry       Date:  2013-09-11       Impact factor: 3.162

Review 9.  Microbial Genes for a Circular and Sustainable Bio-PET Economy.

Authors:  Manuel Salvador; Umar Abdulmutalib; Jaime Gonzalez; Juhyun Kim; Alex A Smith; Jean-Loup Faulon; Ren Wei; Wolfgang Zimmermann; Jose I Jimenez
Journal:  Genes (Basel)       Date:  2019-05-16       Impact factor: 4.096

Review 10.  Molecular adaptation mechanisms employed by ethanologenic bacteria in response to lignocellulose-derived inhibitory compounds.

Authors:  Omodele Ibraheem; Bongani K Ndimba
Journal:  Int J Biol Sci       Date:  2013-06-28       Impact factor: 6.580

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