Literature DB >> 15267730

Combined electronic structure/molecular dynamics approach for ultrafast infrared spectroscopy of dilute HOD in liquid H2O and D2O.

S A Corcelli1, C P Lawrence, J L Skinner.   

Abstract

We present a new approach that combines electronic structure methods and molecular dynamics simulations to investigate the infrared spectroscopy of condensed phase systems. This approach is applied to the OH stretch band of dilute HOD in liquid D2O and the OD stretch band of dilute HOD in liquid H2O for two commonly employed models of water, TIP4P and SPC/E. Ab initio OH and OD anharmonic transition frequencies are calculated for 100 HOD x (D2O)n and HOD x(H2O)n (n = 4-9) clusters randomly selected from liquid water simulations. A linear empirical relationship between the ab initio frequencies and the component of the electric field from the solvent along the bond of interest is developed. This relationship is used in a molecular dynamics simulation to compute frequency fluctuation time-correlation functions and infrared absorption line shapes. The normalized frequency fluctuation time-correlation functions are in good agreement with the results of previous theoretical approaches. Their long-time decay times are 0.5 ps for the TIP4P model and 0.9 ps for the SPC/E model, both of which appear to be somewhat too fast compared to recent experiments. The calculated line shapes are in good agreement with experiment, and improve upon the results of previous theoretical approaches. The methods presented are simple, and transferable to more complicated systems. Copyright 2004 American Institute of Physics

Entities:  

Year:  2004        PMID: 15267730     DOI: 10.1063/1.1683072

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  33 in total

Review 1.  Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction.

Authors:  Carlos R Baiz; Bartosz Błasiak; Jens Bredenbeck; Minhaeng Cho; Jun-Ho Choi; Steven A Corcelli; Arend G Dijkstra; Chi-Jui Feng; Sean Garrett-Roe; Nien-Hui Ge; Magnus W D Hanson-Heine; Jonathan D Hirst; Thomas L C Jansen; Kijeong Kwac; Kevin J Kubarych; Casey H Londergan; Hiroaki Maekawa; Mike Reppert; Shinji Saito; Santanu Roy; James L Skinner; Gerhard Stock; John E Straub; Megan C Thielges; Keisuke Tominaga; Andrei Tokmakoff; Hajime Torii; Lu Wang; Lauren J Webb; Martin T Zanni
Journal:  Chem Rev       Date:  2020-06-29       Impact factor: 60.622

2.  Direct measurements of electric fields in weak OH···π hydrogen bonds.

Authors:  Miguel Saggu; Nicholas M Levinson; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2011-10-12       Impact factor: 15.419

3.  Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules.

Authors:  Matthias M Waegele; Robert M Culik; Feng Gai
Journal:  J Phys Chem Lett       Date:  2011-09-23       Impact factor: 6.475

4.  The nano-structural inhomogeneity of dynamic hydrogen bond network of TIP4P/2005 water.

Authors:  Vladimir Belosludov; Kirill Gets; Ravil Zhdanov; Valery Malinovsky; Yulia Bozhko; Rodion Belosludov; Nikolay Surovtsev; Oleg Subbotin; Yoshiyuki Kawazoe
Journal:  Sci Rep       Date:  2020-04-30       Impact factor: 4.379

5.  Spectral diffusion in a fluctuating charge model of water.

Authors:  S A Corcelli; C P Lawrence; J B Asbury; T Steinel; M D Fayer; J L Skinner
Journal:  J Chem Phys       Date:  2004-11-08       Impact factor: 3.488

6.  Quantum corrections in vibrational and electronic condensed phase spectroscopy: line shapes and echoes.

Authors:  C P Lawrence; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-22       Impact factor: 11.205

7.  Polarizable molecules in the vibrational spectroscopy of water.

Authors:  Edward Harder; Joel D Eaves; Andrei Tokmakoff; B J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-04       Impact factor: 11.205

8.  Photoinduced conformational dynamics of a photoswitchable peptide: a nonequilibrium molecular dynamics simulation study.

Authors:  Phuong H Nguyen; Roman D Gorbunov; Gerhard Stock
Journal:  Biophys J       Date:  2006-05-26       Impact factor: 4.033

9.  Two-dimensional infrared population transfer spectroscopy for enhancing structural markers of proteins.

Authors:  Thomas la Cour Jansen; Jasper Knoester
Journal:  Biophys J       Date:  2007-11-02       Impact factor: 4.033

10.  Hydrogen bonding and Raman, IR, and 2D-IR spectroscopy of dilute HOD in liquid D2O.

Authors:  B Auer; R Kumar; J R Schmidt; J L Skinner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-18       Impact factor: 11.205

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