Literature DB >> 15256543

Genome Update: annotation quality in sequenced microbial genomes.

David W Ussery1, Peter F Hallin1.   

Abstract

Mesh：

Year:  2004        PMID： 15256543     DOI： 10.1099/mic.0.27338-0

Source DB:  PubMed          Journal:  Microbiology (Reading)        ISSN： 1350-0872            Impact factor:   2.777


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  10 in total

1.  Comparative and functional genomic analyses of iron transport and regulation in Leptospira spp.

Authors:  H Louvel; S Bommezzadri; N Zidane; C Boursaux-Eude; S Creno; A Magnier; Z Rouy; C Médigue; I Saint Girons; C Bouchier; M Picardeau
Journal:  J Bacteriol       Date:  2006-09-15       Impact factor: 3.490

2.  An integrative method for identifying the over-annotated protein-coding genes in microbial genomes.

Authors:  Jia-Feng Yu; Ke Xiao; Dong-Ke Jiang; Jing Guo; Ji-Hua Wang; Xiao Sun
Journal:  DNA Res       Date:  2011-09-08       Impact factor: 4.458

3.  Solving the Problem: Genome Annotation Standards before the Data Deluge.

Authors:  William Klimke; Claire O'Donovan; Owen White; J Rodney Brister; Karen Clark; Boris Fedorov; Ilene Mizrachi; Kim D Pruitt; Tatiana Tatusova
Journal:  Stand Genomic Sci       Date:  2011-10-01

4.  MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes.

Authors:  Stéphane Cruveiller; Jérôme Le Saux; David Vallenet; Aurélie Lajus; Stéphanie Bocs; Claudine Médigue
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

5.  Large-scale comparative genomic ranking of taxonomically restricted genes (TRGs) in bacterial and archaeal genomes.

Authors:  Gareth A Wilson; Edward J Feil; Andrew K Lilley; Dawn Field
Journal:  PLoS One       Date:  2007-03-28       Impact factor: 3.240

6.  Estimating overannotation across prokaryotic genomes using BLAST+, UBLAST, LAST and BLAT.

Authors:  Gabriel Moreno-Hagelsieb; Brigitte Hudy-Yuffa
Journal:  BMC Res Notes       Date:  2014-09-16

7.  An approach to describing and analysing bulk biological annotation quality: a case study using UniProtKB.

Authors:  Michael J Bell; Colin S Gillespie; Daniel Swan; Phillip Lord
Journal:  Bioinformatics       Date:  2012-09-15       Impact factor: 6.937

8.  Can inferred provenance and its visualisation be used to detect erroneous annotation? A case study using UniProtKB.

Authors:  Michael J Bell; Matthew Collison; Phillip Lord
Journal:  PLoS One       Date:  2013-10-15       Impact factor: 3.240

9.  Correction of the Caulobacter crescentus NA1000 genome annotation.

Authors:  Bert Ely; LaTia Etheredge Scott
Journal:  PLoS One       Date:  2014-03-12       Impact factor: 3.240

10.  Whole Genome Sequencing Allows Better Understanding of the Evolutionary History of Leptospira interrogans Serovar Hardjo.

Authors:  Alejandro Llanes; Carlos Mario Restrepo; Sreekumari Rajeev
Journal:  PLoS One       Date:  2016-07-21       Impact factor: 3.240
  10 in total

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