Literature DB >> 15247434

Multimerization of poly(rC) binding protein 2 is required for translation initiation mediated by a viral IRES.

Kristin M Bedard1, Brandon L Walter, Bert L Semler.   

Abstract

The cellular protein, poly(rC) binding protein 2 (PCBP2), is known to function in picornavirus cap-independent translation. We have further examined the RNA binding properties and protein-protein interactions of PCBP2 necessary for translation. We have studied its putative multimerization properties utilizing the yeast two-hybrid assay and in vitro biochemical methods, including glutathione S-transferase (GST) pull-down assays and gel filtration. Through genetic analysis, the multimerization domain has been localized to the second K-homologous (KH) RNA binding domain of the protein between amino acids 125 and 158. To examine the function of multimerization in poliovirus translation, we utilized the truncated protein, DeltaKH1-PCBP2, which is capable of multimer formation, but does not bind poliovirus stem-loop IV RNA (an interaction required for translation). Utilizing RNA binding and in vitro translation assays, this protein was shown to act as a dominant negative, suggesting that PCBP2 multimerization functions in poliovirus translation and RNA binding. Additionally, PCBP2 containing a deletion in the multimerization domain (DeltaKH2-PCBP2) was not able to bind poliovirus stem-loop IV RNA and could not rescue translation in extracts that were depleted of endogenous PCBP2. Results from these experiments suggest that the multimerization of PCBP2 is required for efficient RNA binding and cap-independent translation of poliovirus RNA. By examining the functional interactions of the cellular protein PCBP2, we have discovered a novel determinant in the mechanism of picornavirus cap-independent translation.

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Year:  2004        PMID: 15247434      PMCID: PMC1370616          DOI: 10.1261/rna.7070304

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  33 in total

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Authors:  J H Kim; B Hahm; Y K Kim; M Choi; S K Jang
Journal:  J Mol Biol       Date:  2000-05-05       Impact factor: 5.469

2.  Interactions of viral protein 3CD and poly(rC) binding protein with the 5' untranslated region of the poliovirus genome.

Authors:  A V Gamarnik; R Andino
Journal:  J Virol       Date:  2000-03       Impact factor: 5.103

Review 3.  Internal ribosome entry sites in eukaryotic mRNA molecules.

Authors:  C U Hellen; P Sarnow
Journal:  Genes Dev       Date:  2001-07-01       Impact factor: 11.361

4.  The KH domains of Xenopus Vg1RBP mediate RNA binding and self-association.

Authors:  Anna Git; Nancy Standart
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

5.  Identification of two novel mammalian genes establishes a subfamily of KH-domain RNA-binding proteins.

Authors:  A V Makeyev; S A Liebhaber
Journal:  Genomics       Date:  2000-08-01       Impact factor: 5.736

6.  Poly (rC) binding protein 2 forms a ternary complex with the 5'-terminal sequences of poliovirus RNA and the viral 3CD proteinase.

Authors:  T B Parsley; J S Towner; L B Blyn; E Ehrenfeld; B L Semler
Journal:  RNA       Date:  1997-10       Impact factor: 4.942

7.  Interaction of two multifunctional proteins. Heterogeneous nuclear ribonucleoprotein K and Y-box-binding protein.

Authors:  M Shnyreva; D S Schullery; H Suzuki; Y Higaki; K Bomsztyk
Journal:  J Biol Chem       Date:  2000-05-19       Impact factor: 5.157

Review 8.  The poly(C)-binding proteins: a multiplicity of functions and a search for mechanisms.

Authors:  Aleksandr V Makeyev; Stephen A Liebhaber
Journal:  RNA       Date:  2002-03       Impact factor: 4.942

9.  Characterization of the interaction between alphaCP(2) and the 3'-untranslated region of collagen alpha1(I) mRNA.

Authors:  J N Lindquist; S G Kauschke; B Stefanovic; E R Burchardt; D A Brenner
Journal:  Nucleic Acids Res       Date:  2000-11-01       Impact factor: 16.971

10.  Differential utilization of poly(rC) binding protein 2 in translation directed by picornavirus IRES elements.

Authors:  B L Walter; J H Nguyen; E Ehrenfeld; B L Semler
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

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  30 in total

1.  Poly(C)-binding protein 2 interacts with sequences required for viral replication in the hepatitis C virus (HCV) 5' untranslated region and directs HCV RNA replication through circularizing the viral genome.

Authors:  Linya Wang; King-Song Jeng; Michael M C Lai
Journal:  J Virol       Date:  2011-06-01       Impact factor: 5.103

2.  Heterogeneous nuclear ribonucleoprotein (hnRNP) E1 binds to hnRNP A2 and inhibits translation of A2 response element mRNAs.

Authors:  Linda D Kosturko; Michael J Maggipinto; George Korza; Joo Won Lee; John H Carson; Elisa Barbarese
Journal:  Mol Biol Cell       Date:  2006-06-14       Impact factor: 4.138

3.  A nucleo-cytoplasmic SR protein functions in viral IRES-mediated translation initiation.

Authors:  Kristin M Bedard; Sarah Daijogo; Bert L Semler
Journal:  EMBO J       Date:  2006-12-21       Impact factor: 11.598

4.  Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation.

Authors:  Olga Fernández-Miragall; Ricardo Ramos; Jorge Ramajo; Encarnación Martínez-Salas
Journal:  RNA       Date:  2005-12-22       Impact factor: 4.942

5.  Cellular protein modification by poliovirus: the two faces of poly(rC)-binding protein.

Authors:  Rushika Perera; Sarah Daijogo; Brandon L Walter; Joseph H C Nguyen; Bert L Semler
Journal:  J Virol       Date:  2007-06-20       Impact factor: 5.103

6.  Identification of PCBP2, a facilitator of IRES-mediated translation, as a novel constituent of stress granules and processing bodies.

Authors:  Ken Fujimura; Fumi Kano; Masayuki Murata
Journal:  RNA       Date:  2008-01-03       Impact factor: 4.942

7.  Mechanistic consequences of hnRNP C binding to both RNA termini of poliovirus negative-strand RNA intermediates.

Authors:  Kenneth J Ertel; Jo Ellen Brunner; Bert L Semler
Journal:  J Virol       Date:  2010-02-17       Impact factor: 5.103

8.  Altered interactions between stem-loop IV within the 5' noncoding region of coxsackievirus RNA and poly(rC) binding protein 2: effects on IRES-mediated translation and viral infectivity.

Authors:  Polen Sean; Joseph H C Nguyen; Bert L Semler
Journal:  Virology       Date:  2009-05-14       Impact factor: 3.616

9.  The 5'CL-PCBP RNP complex, 3' poly(A) tail and 2A(pro) are required for optimal translation of poliovirus RNA.

Authors:  Sushma A Ogram; Allyn Spear; Nidhi Sharma; James B Flanegan
Journal:  Virology       Date:  2009-11-27       Impact factor: 3.616

10.  In vitro molecular characterization of RNA-proteins interactions during initiation of translation of a wild-type and a mutant Coxsackievirus B3 RNAs.

Authors:  Amira Souii; Manel Ben M'hadheb-Gharbi; Mahjoub Aouni; Jawhar Gharbi
Journal:  Mol Biotechnol       Date:  2013-06       Impact factor: 2.695

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