Literature DB >> 15246526

The complete mitochondrial genome of the javeline goby Acanthogobius hasta (Perciformes, Gobiidae) and phylogenetic considerations.

Il-Chan Kim1, Hee-Seok Kweon, Young Ja Kim, Chang-Bae Kim, Myung Chan Gye, Wan-Ok Lee, Yong-Sung Lee, Jae-Seong Lee.   

Abstract

We isolated Acanthogobius hasta mitochondrial DNA by long-polymerase chain reaction (long-PCR) with conserved primers, and sequenced this mitogenome with primer walking. The resultant A. hasta mitochondrial DNA sequence was found to consist of 16,663 bp with a structural organization conserved relative to that of other fish. In this paper, we report the basic characteristics of the A. hasta mitochondrial genome including structural organization, base composition of rRNAs and the tRNAs and protein-encoding genes, and characteristics of mitochondrial tRNAs. These findings are applicable to molecular phylogenetics in the suborder Gobioidei.

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Year:  2004        PMID： 15246526     DOI： 10.1016/j.gene.2004.04.009

Source DB:  PubMed          Journal:  Gene        ISSN： 0378-1119            Impact factor:   3.688


  17 in total

1.  Complete mitochondrial genome sequence of Tridentiger bifasciatus and Tridentiger barbatus (Perciformes, Gobiidae): a mitogenomic perspective on the phylogenetic relationships of Gobiidae.

Authors:  Xiaoxiao Jin; Rixin Wang; Tao Wei; Da Tang; Tianjun Xu
Journal:  Mol Biol Rep       Date:  2014-09-27       Impact factor: 2.316

2.  The complete mitochondrial genome of bighead croaker, Collichthys niveatus (Perciformes, Sciaenidae): structure of control region and phylogenetic considerations.

Authors:  Tian-Jun Xu; Yuan-Zhi Cheng; Yue-Na Sun; Ge Shi; Ri-Xin Wang
Journal:  Mol Biol Rep       Date:  2010-12-04       Impact factor: 2.316

3.  The complete mitochondrial genome of the Chinese longsnout catfish Leiocassis longirostris (Siluriformes: Bagridae) and a time-calibrated phylogeny of ostariophysan fishes.

Authors:  Jialian Wang; Tong Shen; Jianfeng Ju; Guang Yang
Journal:  Mol Biol Rep       Date:  2010-11-21       Impact factor: 2.316

Review 4.  The QPCR assay for analysis of mitochondrial DNA damage, repair, and relative copy number.

Authors:  Senyene E Hunter; Dawoon Jung; Richard T Di Giulio; Joel N Meyer
Journal:  Methods       Date:  2010-02-01       Impact factor: 3.608

5.  Novel Gene Rearrangement in the Mitochondrial Genome of Three Garra and Insights Into the Phylogenetic Relationships of Labeoninae.

Authors:  Chi Zhang; Kun Zhang; Ying Peng; Jianshe Zhou; Yifan Liu; Bingjian Liu
Journal:  Front Genet       Date:  2022-06-08       Impact factor: 4.772

6.  Comparative chronic liver toxicity of benzo[a]pyrene in two populations of the atlantic killifish (Fundulus heteroclitus) with different exposure histories.

Authors:  Lauren P Wills; Dawoon Jung; Kara Koehrn; Shiqian Zhu; Kristine L Willett; David E Hinton; Richard T Di Giulio
Journal:  Environ Health Perspect       Date:  2010-05-25       Impact factor: 9.031

7.  The long amplicon quantitative PCR for DNA damage assay as a sensitive method of assessing DNA damage in the environmental model, Atlantic killifish (Fundulus heteroclitus).

Authors:  Dawoon Jung; Youngeun Cho; Joel N Meyer; Richard T Di Giulio
Journal:  Comp Biochem Physiol C Toxicol Pharmacol       Date:  2008-07-24       Impact factor: 3.228

8.  The complete mitochondrial genome of rock carp Procypris rabaudi (Cypriniformes: Cyprinidae) and phylogenetic implications.

Authors:  Xiuyue Zhang; Bisong Yue; Wanxiang Jiang; Zhaobin Song
Journal:  Mol Biol Rep       Date:  2008-05-22       Impact factor: 2.316

9.  Complete sequence of the mitochondrial genome of Odontamblyopus rubicundus (Perciformes: Gobiidae): genome characterization and phylogenetic analysis.

Authors:  Tianxing Liu; Xiaoxiao Jin; Rixin Wang; Tianjun Xu
Journal:  J Genet       Date:  2013-12       Impact factor: 1.166

10.  Comparative Mitogenomics of the Genus Odontobutis (Perciformes: Gobioidei: Odontobutidae) Revealed Conserved Gene Rearrangement and High Sequence Variations.

Authors:  Zhihong Ma; Xuefen Yang; Miklos Bercsenyi; Junjie Wu; Yongyao Yu; Kaijian Wei; Qixue Fan; Ruibin Yang
Journal:  Int J Mol Sci       Date:  2015-10-20       Impact factor: 5.923
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