Literature DB >> 15241011

Targeted generation of 16 sequence-tagged sites for bovine chromosome region 5q21-q25 by microdissection.

Tom Goldammer1, Karin Rottengatter, Rosemarie Weikard, Rolf Horstmann, Annette Gehlhaus, Ronald M Brunner, Olivier Hanotte, Manfred Schwerin.   

Abstract

The cattle chromosome region BTA5q21-q25 is associated with immune defense and is linked with several economically important traits for growth, ovulation, twinning and milk yield. Chromosome microdissection of the region was performed to generate fragment-specific DNA libraries and to provide new bovine-specific DNA sequences as starting material for physical fine-mapping approaches or linkage studies. A first library screening resulted in the identification of 16 region-specific sequence-tagged sites (STS). Fifteen STS represent new unique cattle DNA sequences, of which one identifies a new microsatellite. Homology with the gene CDK2 was found for the remaining STS.

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Year:  2004        PMID: 15241011     DOI: 10.1023/B:CHRO.0000034102.54635.b9

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  21 in total

1.  Development of 47 new microsatellite markers from a BTA6 library.

Authors:  K M Reed; N Ihara; F A Ponce de León; T S Sonstegard; T P L Smith; G L Bennett; Y Sugimoto; C W Beattie
Journal:  Anim Biotechnol       Date:  2002-11       Impact factor: 2.282

2.  The use of laser microdissection for the preparation of chromosome-specific painting probes in farm animals.

Authors:  Svatava Kubickova; Halina Cernohorska; Petra Musilova; Jiri Rubes
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  High-resolution human/goat comparative map of the goat polled/intersex syndrome (PIS): the human homologue is contained in a human YAC from HSA3q23.

Authors:  D Vaiman; L Schibler; A Oustry-Vaiman; E Pailhoux; T Goldammer; M Stevanovic; J P Furet; M Schwerin; C Cotinot; M Fellous; E P Cribiu
Journal:  Genomics       Date:  1999-02-15       Impact factor: 5.736

4.  Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer.

Authors:  H Telenius; N P Carter; C E Bebb; M Nordenskjöld; B A Ponder; A Tunnacliffe
Journal:  Genomics       Date:  1992-07       Impact factor: 5.736

5.  Generation of chromosome fragment specific bovine DNA sequences by microdissection and DOP-PCR.

Authors:  T Goldammer; R Weikard; R M Brunner; M Schwerin
Journal:  Mamm Genome       Date:  1996-04       Impact factor: 2.957

6.  Delineation of individual human chromosomes in metaphase and interphase cells by in situ suppression hybridization using recombinant DNA libraries.

Authors:  P Lichter; T Cremer; J Borden; L Manuelidis; D C Ward
Journal:  Hum Genet       Date:  1988-11       Impact factor: 4.132

7.  Targeted construction of a high-resolution, integrated, comprehensive, and comparative map for a region specific to bovine chromosome 6 based on radiation hybrid mapping.

Authors:  Rosemarie Weikard; Christa Kühn; Tom Goldammer; Pascal Laurent; James E Womack; Manfred Schwerin
Journal:  Genomics       Date:  2002-06       Impact factor: 5.736

8.  An ordered comparative map of the cattle and human genomes.

Authors:  M R Band; J H Larson; M Rebeiz; C A Green; D W Heyen; J Donovan; R Windish; C Steining; P Mahyuddin; J E Womack; H A Lewin
Journal:  Genome Res       Date:  2000-09       Impact factor: 9.043

9.  Apoptosis induced by a human milk protein.

Authors:  A Håkansson; B Zhivotovsky; S Orrenius; H Sabharwal; C Svanborg
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

10.  Combined analysis of data from two granddaughter designs: A simple strategy for QTL confirmation and increasing experimental power in dairy cattle.

Authors:  Jörn Bennewitz; Norbert Reinsch; Cécile Grohs; Hubert Levéziel; Alain Malafosse; Hauke Thomsen; Ningying Xu; Christian Looft; Christa Kühn; Gudrun A Brockmann; Manfred Schwerin; Christina Weimann; Stefan Hiendleder; Georg Erhardt; Ivica Medjugorac; Ingolf Russ; Martin Förster; Bertram Brenig; Fritz Reinhardt; Reinhard Reents; Gottfried Averdunk; Jürgen Blümel; Didier Boichard; Ernst Kalm
Journal:  Genet Sel Evol       Date:  2003 May-Jun       Impact factor: 4.297

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  1 in total

1.  The development of chromosome microdissection and microcloning technique and its applications in genomic research.

Authors:  Ruo-Nan Zhou; Zan-Min Hu
Journal:  Curr Genomics       Date:  2007-03       Impact factor: 2.236

  1 in total

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