Literature DB >> 15240472

NMR study on the binding of neuropeptide achatin-I to phospholipid bilayer: the equilibrium, location, and peptide conformation.

Tomohiro Kimura1, Emiko Okamura, Nobuyuki Matubayasi, Koji Asami, Masaru Nakahara.   

Abstract

Molecular mechanism of the binding of neuropeptide achatin-I (Gly-D-Phe-Ala-Asp) to large unilamellar vesicles of zwitterionic egg-yolk phosphatidylcholine (EPC) was investigated by means of natural-abundance (13)C and high-resolution (of 0.01 Hz order) (1)H NMR spectroscopy. The binding equilibrium was found to be sensitive to the ionization state of the N-terminal NH(3)(+) group in achatin-I; the de-ionization of NH(3)(+) decreases the bound fraction of the peptide from approximately 15% to nearly none. The electrostatic attraction between the N-terminal positive NH(3)(+) group and the negative PO(4)(-) group in the EPC headgroup plays an important role in controlling the equilibrium. Analysis of the (13)C chemical shifts (delta) of EPC showed that the binding location of the peptide within the bilayer is the polar region between the glycerol and ester groups. The binding caused upfield changes Delta delta of the (13)C resonance for almost all the carbon sites in achatin-I. The changes Delta delta for the ionic Asp at the C-terminus are more than five times as large as those for the other residues. The drastic changes for Asp result from the dehydration of the ionic CO(2)(-) groups, which are strongly hydrated by electrostatic interactions in bulk water. The side-chain conformational equilibria of the aromatic d-Phe and ionic Asp residues were both affected by the binding, and the induced changes in the equilibria appear to reflect the peptide-lipid hydrophobic interactions.

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Year:  2004        PMID: 15240472      PMCID: PMC1304359          DOI: 10.1529/biophysj.103.038950

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  24 in total

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Journal:  Biochemistry       Date:  1980-01-22       Impact factor: 3.162

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Journal:  Biophys J       Date:  1994-06       Impact factor: 4.033

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  3 in total

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Authors:  Michelle E Weber; Elizabeth K Elliott; George W Gokel
Journal:  Org Biomol Chem       Date:  2005-11-30       Impact factor: 3.876

Review 2.  NMR of molecules interacting with lipids in small unilamellar vesicles.

Authors:  Grégory Da Costa; Liza Mouret; Soizic Chevance; Elisabeth Le Rumeur; Arnaud Bondon
Journal:  Eur Biophys J       Date:  2007-06-13       Impact factor: 1.733

3.  Location, structure, and dynamics of the synthetic cannabinoid ligand CP-55,940 in lipid bilayers.

Authors:  Tomohiro Kimura; Kejun Cheng; Kenner C Rice; Klaus Gawrisch
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

  3 in total

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