Literature DB >> 15236590

Mössbauer characterization of an unusual high-spin side-on peroxo-Fe3+ species in the active site of superoxide reductase from Desulfoarculus Baarsii. Density functional calculations on related models.

Olivier Horner1, Jean-Marie Mouesca, Jean-Louis Oddou, Claudine Jeandey, Vincent Nivière, Tony A Mattioli, Christelle Mathé, Marc Fontecave, Pascale Maldivi, Pierre Bonville, Jason A Halfen, Jean-Marc Latour.   

Abstract

Superoxide reductase (SOR) is an Fe protein that catalyzes the reduction of superoxide to give H(2)O(2). Recently, the mutation of the Glu47 residue into alanine (E47A) in the active site of SOR from Desulfoarculus baarsii has allowed the stabilization of an iron-peroxo species when quickly reacted with H(2)O(2) [Mathé et al. (2002) J. Am. Chem. Soc. 124, 4966-4967]. To further investigate this non-heme peroxo-iron species, we have carried out a Mössbauer study of the (57)Fe-enriched E47A SOR from D. baarsii reacted quickly with H(2)O(2). Considering the Mössbauer data, we conclude, in conjunction with the other spectroscopic data available and with the results of density functional calculations on related models, that this species corresponds to a high-spin side-on peroxo-Fe(3+) complex. This is one of the first examples of such a species in a biological system for which Mössbauer parameters are now available: delta(/Fe) = 0.54 (1) mm/s, DeltaE(Q) = -0.80 (5) mm/s, and the asymmetry parameter eta = 0.60 (5) mm/s. The Mössbauer and spin Hamiltonian parameters have been evaluated on a model from the side-on peroxo complex (model 2) issued from the oxidized iron center in SOR from Pyrococcus furiosus, for which structural data are available in the literature [Yeh et al. (2000) Biochemistry 39, 2499-2508]. For comparison, similar calculations have been carried out on a model derived from 2 (model 3), where the [CH(3)-S](1)(-) group has been replaced by the neutral [NH(3)](0) group [Neese and Solomon (1998) J. Am. Chem. Soc. 120, 12829-12848]. Both models 2 and 3 contain a formally high-spin Fe(3+) ion (i.e., with empty minority spin orbitals). We found, however, a significant fraction ( approximately 0.6 for 2, approximately 0.8 for 3) of spin (equivalently charge) spread over two occupied (minority spin) orbitals. The quadrupole splitting value for 2 is found to be negative and matches quite well the experimental value. The computed quadrupole tensors are rhombic in the case of 2 and axial in the case of 3. This difference originates directly from the presence of the thiolate ligand in 2. A correlation between experimental isomer shifts for Fe(3+) mononuclear complexes with computed electron densities at the iron nucleus has been built and used to evaluate the isomer shift values for 2 and 3 (0.56 and 0.63 mm/s, respectively). A significant increase of isomer shift value is found upon going from a methylthiolate to a nitrogen ligand for the Fe(3+) ion, consistent with covalency effects due to the presence of the axial thiolate ligand. Considering that the isomer shift value for 3 is likely to be in the 0.61-0.65 mm/s range [Horner et al. (2002) Eur. J. Inorg. Chem., 3278-3283], the isomer shift value for a high-spin eta(2)-O(2) Fe(3+) complex with an axial thiolate group can be estimated to be in the 0.54-0.58 mm/s range. The occurrence of a side-on peroxo intermediate in SOR is discussed in relation to the recent data published for a side-on peroxo-Fe(3+) species in another biological system [Karlsson et al. (2003) Science 299, 1039-1042].

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Year:  2004        PMID: 15236590     DOI: 10.1021/bi0498151

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

Review 1.  Superoxide dismutases and superoxide reductases.

Authors:  Yuewei Sheng; Isabel A Abreu; Diane E Cabelli; Michael J Maroney; Anne-Frances Miller; Miguel Teixeira; Joan Selverstone Valentine
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

2.  X-ray absorption spectroscopy and reactivity of thiolate-ligated Fe(III)-OOR complexes.

Authors:  Jay Stasser; Frances Namuswe; Gary D Kasper; Yunbo Jiang; Courtney M Krest; Michael T Green; James Penner-Hahn; David P Goldberg
Journal:  Inorg Chem       Date:  2010-10-18       Impact factor: 5.165

3.  Geometries and electronic structures of cyanide adducts of the non-heme iron active site of superoxide reductases: vibrational and ENDOR studies.

Authors:  Michael D Clay; Tran-Chin Yang; Francis E Jenney; Irene Y Kung; Christopher A Cosper; Rangan Krishnan; Donald M Kurtz; Michael W W Adams; Brian M Hoffman; Michael K Johnson
Journal:  Biochemistry       Date:  2006-01-17       Impact factor: 3.162

4.  A functional model for the cysteinate-ligated non-heme iron enzyme superoxide reductase (SOR).

Authors:  Terutaka Kitagawa; Abhishek Dey; Priscilla Lugo-Mas; Jason B Benedict; Werner Kaminsky; Edward Solomon; Julie A Kovacs
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

5.  Influence of the nitrogen donors on nonheme iron models of superoxide reductase: high-spin Fe(III)-OOR complexes.

Authors:  Frances Namuswe; Takahiro Hayashi; Yunbo Jiang; Gary D Kasper; Amy A Narducci Sarjeant; Pierre Moënne-Loccoz; David P Goldberg
Journal:  J Am Chem Soc       Date:  2010-01-13       Impact factor: 15.419

6.  Sulfur K-edge X-ray absorption spectroscopy and density functional theory calculations on superoxide reductase: role of the axial thiolate in reactivity.

Authors:  Abhishek Dey; Francis E Jenney; Michael W W Adams; Michael K Johnson; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2007-09-22       Impact factor: 15.419

7.  Rational tuning of the thiolate donor in model complexes of superoxide reductase: direct evidence for a trans influence in Fe(III)-OOR complexes.

Authors:  Frances Namuswe; Gary D Kasper; Amy A Narducci Sarjeant; Takahiro Hayashi; Courtney M Krest; Michael T Green; Pierre Moënne-Loccoz; David P Goldberg
Journal:  J Am Chem Soc       Date:  2008-10-07       Impact factor: 15.419

8.  Fe-O versus O-O bond cleavage in reactive iron peroxide intermediates of superoxide reductase.

Authors:  Amr Ali Ahmed Ali Attia; Daniela Cioloboc; Alexandru Lupan; Radu Silaghi-Dumitrescu
Journal:  J Biol Inorg Chem       Date:  2012-11-08       Impact factor: 3.358

9.  Spectroscopic description of an unusual protonated ferryl species in the catalase from Proteus mirabilis and density functional theory calculations on related models. Consequences for the ferryl protonation state in catalase, peroxidase and chloroperoxidase.

Authors:  O Horner; J-M Mouesca; P L Solari; M Orio; J-L Oddou; P Bonville; H M Jouve
Journal:  J Biol Inorg Chem       Date:  2007-01-20       Impact factor: 3.862

10.  SORGOdb: Superoxide Reductase Gene Ontology curated DataBase.

Authors:  Céline Lucchetti-Miganeh; David Goudenège; David Thybert; Gilles Salbert; Frédérique Barloy-Hubler
Journal:  BMC Microbiol       Date:  2011-05-16       Impact factor: 3.605

  10 in total

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