Literature DB >> 15234515

Methods of studying soil microbial diversity.

Jennifer L Kirk1, Lee A Beaudette, Miranda Hart, Peter Moutoglis, John N Klironomos, Hung Lee, Jack T Trevors.   

Abstract

Soil microorganisms, such as bacteria and fungi, play central roles in soil fertility and promoting plant health. This review examines and compares the various methods used to study microbial diversity in soil.

Mesh：

Substances：

Year:  2004        PMID： 15234515     DOI： 10.1016/j.mimet.2004.04.006

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN： 0167-7012            Impact factor:   2.363


  90 in total

1.  Ecological significance of microdiversity: coexistence among casing soil bacterial strains through allocation of nutritional resource.

Authors:  Devendra Kumar Choudhary; Bhavdish N Johri
Journal:  Indian J Microbiol       Date:  2011-01-26       Impact factor: 2.461

2.  GC-based detection of aldononitrile acetate derivatized glucosamine and muramic acid for microbial residue determination in soil.

Authors:  Chao Liang; Harry W Read; Teri C Balser
Journal:  J Vis Exp       Date:  2012-05-19       Impact factor: 1.355

3.  Community structure analyses are more sensitive to differences in soil bacterial communities than anonymous diversity indices.

Authors:  Martin Hartmann; Franco Widmer
Journal:  Appl Environ Microbiol       Date:  2006-10-13       Impact factor: 4.792

Review 4.  Cadaver decomposition in terrestrial ecosystems.

Authors:  David O Carter; David Yellowlees; Mark Tibbett
Journal:  Naturwissenschaften       Date:  2006-11-08

5.  Improvements of polymerase chain reaction and capillary electrophoresis single-strand conformation polymorphism methods in microbial ecology: toward a high-throughput method for microbial diversity studies in soil.

Authors:  Lucie Zinger; Jérôme Gury; Frédéric Giraud; Serge Krivobok; Ludovic Gielly; Pierre Taberlet; Roberto A Geremia
Journal:  Microb Ecol       Date:  2007-06-22       Impact factor: 4.552

6.  Serial analysis of rRNA genes and the unexpected dominance of rare members of microbial communities.

Authors:  Matthew N Ashby; Jasper Rine; Emmanuel F Mongodin; Karen E Nelson; Dago Dimster-Denk
Journal:  Appl Environ Microbiol       Date:  2007-05-25       Impact factor: 4.792

Review 7.  Genotypic microbial community profiling: a critical technical review.

Authors:  Andreas Nocker; Mark Burr; Anne K Camper
Journal:  Microb Ecol       Date:  2007-03-08       Impact factor: 4.552

8.  Cultivation-independent analysis of fungal genotypes in soil by using simple sequence repeat markers.

Authors:  Kaspar Schwarzenbach; Franco Widmer; Jürg Enkerli
Journal:  Appl Environ Microbiol       Date:  2007-08-24       Impact factor: 4.792

9.  Selection of enzymes for terminal restriction fragment length polymorphism analysis of fungal internally transcribed spacer sequences.

Authors:  Pablo Alvarado; Jose L Manjón
Journal:  Appl Environ Microbiol       Date:  2009-05-22       Impact factor: 4.792

10.  Estimation by PLFA of microbial community structure associated with the rhizosphere of Lygeum spartum and Piptatherum miliaceum growing in semiarid mine tailings.

Authors:  Lucía Carrasco; Andreas Gattinger; Andreas Fliessbach; Antonio Roldán; Michael Schloter; Fuensanta Caravaca
Journal:  Microb Ecol       Date:  2009-12-18       Impact factor: 4.552
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