Literature DB >> 15213429

Quantification of H/D isotope effects on protein hydrogen-bonds by h3JNC' and 1JNC' couplings and peptide group 15N and 13C' chemical shifts.

Victor A Jaravine1, Florence Cordier, Stephan Grzesiek.   

Abstract

The effect of hydrogen/deuterium exchange on protein hydrogen bond coupling constants (h3)J(NC') has been investigated in the small globular protein ubiquitin. The couplings across deuterated or protonated hydrogen bonds were measured by a long-range quantitative HA(CACO)NCO experiment. The analysis is combined with a determination of the H(N)/D(N) isotope effect on the amide group (1)J(NC') couplings and the (15)N and (13)C' chemical shifts. On average, H-bond deuteration exchange weakens (h3)J(NC') and strengthens (1)J(NC') couplings. A correlation is found between the size of the (15)N isotope shift, the (15)N chemical shift, and the (h3)J(NC') coupling constants. The data are consistent with a reduction of donor-acceptor overlap as expected from the classical Ubbelohde effect and the common understanding that H(N)/D(N) exchange leads to a shortening of the N-hydron bond length.

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Year:  2004        PMID: 15213429     DOI: 10.1023/B:JNMR.0000032516.87434.35

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  8 in total

1.  Accurate measurement of 15N-13C residual dipolar couplings in nucleic acids.

Authors:  Christopher P Jaroniec; Jérôme Boisbouvier; Izabela Tworowska; Edward P Nikonowicz; Ad Bax
Journal:  J Biomol NMR       Date:  2005-03       Impact factor: 2.835

2.  Observation of α-Helical Hydrogen-Bond Cooperativity in an Intact Protein.

Authors:  Jingwen Li; Yefei Wang; Jingfei Chen; Zhijun Liu; Ad Bax; Lishan Yao
Journal:  J Am Chem Soc       Date:  2016-02-08       Impact factor: 15.419

3.  Quantification of protein backbone hydrogen-deuterium exchange rates by solid state NMR spectroscopy.

Authors:  Juan-Miguel Lopez del Amo; Uwe Fink; Bernd Reif
Journal:  J Biomol NMR       Date:  2010-10-20       Impact factor: 2.835

4.  Deuterium induces a distinctive Escherichia coli proteome that correlates with the reduction in growth rate.

Authors:  Christian Opitz; Erik Ahrné; Kenneth N Goldie; Alexander Schmidt; Stephan Grzesiek
Journal:  J Biol Chem       Date:  2018-12-13       Impact factor: 5.157

5.  Accurate measurements of the effects of deuteration at backbone amide positions on the chemical shifts of ¹⁵N, ¹³Cα, ¹³Cβ, ¹³CO and ¹Hα nuclei in proteins.

Authors:  Daoning Zhang; Vitali Tugarinov
Journal:  J Biomol NMR       Date:  2013-04-24       Impact factor: 2.835

6.  Deuterium isotope effects on 15N backbone chemical shifts in proteins.

Authors:  Jens Abildgaard; Poul Erik Hansen; Marlon N Manalo; Andy LiWang
Journal:  J Biomol NMR       Date:  2009-05-20       Impact factor: 2.835

7.  Isotopically induced variation in the stability of FMN-wrapped carbon nanotubes.

Authors:  R Sharifi; D C Abanulo; F Papadimitrakopoulos
Journal:  Langmuir       Date:  2013-02-12       Impact factor: 3.882

8.  Hydrogen bond coupling in the ketosteroid isomerase active site.

Authors:  Paul A Sigala; Jose M M Caaveiro; Dagmar Ringe; Gregory A Petsko; Daniel Herschlag
Journal:  Biochemistry       Date:  2009-07-28       Impact factor: 3.162

  8 in total

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