Literature DB >> 15213394

Expression, purification, crystallization and preliminary X-ray analysis of alpha-L-arabinofuranosidase B from Aspergillus kawachii.

Akimasa Miyanaga1, Takuya Koseki, Hiroshi Matsuzawa, Takayoshi Wakagi, Hirofumi Shoun, Shinya Fushinobu.   

Abstract

Alpha-L-Arabinofuranosidase (EC 3.2.1.55) is one of the hemicellulases that cleave the glycosidic bonds between L-arabinofuranoside side chains and various oligosaccharides. In this study, the first crystallization and preliminary X-ray analysis of alpha-L-arabinofuranosidase B from Aspergillus kawachii IFO4308 (AkAbfB), a family 54 glycoside hydrolase, is described. Recombinant AkAbfB was expressed in Escherichia coli and Pichia pastoris. The native crystals of recombinant AkAbfB produced by P. pastoris belong to the orthorhombic space group P2(1)2(1)2(1) (unit-cell parameters a = 39.5, b = 98.2, c = 144.0 A) and diffracted X-rays to a resolution of 1.82 A.

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Year:  2004        PMID: 15213394     DOI: 10.1107/S0907444904010108

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  2 in total

1.  The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose.

Authors:  Akimasa Miyanaga; Takuya Koseki; Yozo Miwa; Yuichiro Mese; Sachiko Nakamura; Atsushi Kuno; Jun Hirabayashi; Hiroshi Matsuzawa; Takayoshi Wakagi; Hirofumi Shoun; Shinya Fushinobu
Journal:  Biochem J       Date:  2006-11-01       Impact factor: 3.857

2.  Rational Design of Mechanism-Based Inhibitors and Activity-Based Probes for the Identification of Retaining α-l-Arabinofuranosidases.

Authors:  Nicholas G S McGregor; Marta Artola; Alba Nin-Hill; Daniël Linzel; Mireille Haon; Jos Reijngoud; Arthur Ram; Marie-Noëlle Rosso; Gijsbert A van der Marel; Jeroen D C Codée; Gilles P van Wezel; Jean-Guy Berrin; Carme Rovira; Herman S Overkleeft; Gideon J Davies
Journal:  J Am Chem Soc       Date:  2020-02-26       Impact factor: 15.419

  2 in total

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