Literature DB >> 15201447

Genetic assays for triplet repeat instability in yeast.

Michael J Dixon1, Saumitri Bhattacharyya, Robert S Lahue.   

Abstract

The unusual genetic features of trinucleotide repeat (TNR) diseases have stimulated a substantial body of research into the underlying molecular mechanisms of repeat instability. As one useful tool to study TNR instability, selectable genetic assays for expansions and contractions were developed in the yeast Saccharomyces cerevisiae. These assays are sensitive, quantitative, easy to manipulate, and reproducible. Once colonies are identified through genetic selection, follow-up experiments with PCR help detail the precise molecular changes that occurred at the TNR tract. This chapter describes these yeast assays and provides useful technical insights into creating and testing triplet repeat instability in a classic model system.

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Year:  2004        PMID: 15201447     DOI: 10.1385/1-59259-804-8:029

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  10 in total

Review 1.  Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.

Authors:  Guy-Franck Richard; Alix Kerrest; Bernard Dujon
Journal:  Microbiol Mol Biol Rev       Date:  2008-12       Impact factor: 11.056

2.  Msh2-Msh3 interferes with Okazaki fragment processing to promote trinucleotide repeat expansions.

Authors:  Athena Kantartzis; Gregory M Williams; Lata Balakrishnan; Rick L Roberts; Jennifer A Surtees; Robert A Bambara
Journal:  Cell Rep       Date:  2012-08-02       Impact factor: 9.423

3.  Postreplication repair inhibits CAG.CTG repeat expansions in Saccharomyces cerevisiae.

Authors:  Danielle L Daee; Tony Mertz; Robert S Lahue
Journal:  Mol Cell Biol       Date:  2006-10-23       Impact factor: 4.272

Review 4.  Methods to determine DNA structural alterations and genetic instability.

Authors:  Guliang Wang; Junhua Zhao; Karen M Vasquez
Journal:  Methods       Date:  2009-02-24       Impact factor: 3.608

5.  Mrc1, Tof1 and Csm3 inhibit CAG.CTG repeat instability by at least two mechanisms.

Authors:  David F Razidlo; Robert S Lahue
Journal:  DNA Repair (Amst)       Date:  2008-03-05

6.  The 26S proteasome drives trinucleotide repeat expansions.

Authors:  Claire Concannon; Robert S Lahue
Journal:  Nucleic Acids Res       Date:  2013-04-24       Impact factor: 16.971

7.  Anc1, a protein associated with multiple transcription complexes, is involved in postreplication repair pathway in S. cerevisiae.

Authors:  Rachel L Erlich; Rebecca C Fry; Thomas J Begley; Danielle L Daee; Robert S Lahue; Leona D Samson
Journal:  PLoS One       Date:  2008-11-13       Impact factor: 3.240

8.  Defects in the GINS complex increase the instability of repetitive sequences via a recombination-dependent mechanism.

Authors:  Malgorzata Jedrychowska; Milena Denkiewicz-Kruk; Malgorzata Alabrudzinska; Adrianna Skoneczna; Piotr Jonczyk; Michal Dmowski; Iwona J Fijalkowska
Journal:  PLoS Genet       Date:  2019-12-09       Impact factor: 5.917

Review 9.  The dual nature of mismatch repair as antimutator and mutator: for better or for worse.

Authors:  Sara Thornby Bak; Despoina Sakellariou; Javier Pena-Diaz
Journal:  Front Genet       Date:  2014-08-21       Impact factor: 4.599

Review 10.  The central role of DNA damage and repair in CAG repeat diseases.

Authors:  Thomas H Massey; Lesley Jones
Journal:  Dis Model Mech       Date:  2018-01-30       Impact factor: 5.758

  10 in total

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