Literature DB >> 15196484

Bioinformatics integration and agent technology.

K A Karasavvas1, R Baldock, A Burger.   

Abstract

Vast amounts of life sciences data are scattered around the world in the form of a variety of heterogeneous data sources. The need to be able to co-relate relevant information is fundamental to increase the overall knowledge and understanding of a specific subject. Bioinformaticians aspire to find ways to integrate biological data sources for this purpose and system integration is a very important research topic. The purpose of this paper is to provide an overview of important integration issues that should be considered when designing a bioinformatics integration system. The currently prevailing approach for integration is presented with examples of bioinformatics information systems together with their main characteristics. Here, we introduce agent technology and we argue why it provides an appropriate solution for designing bioinformatics integration systems.

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Year:  2004        PMID: 15196484     DOI: 10.1016/j.jbi.2004.04.003

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  7 in total

Review 1.  [Oncological data elements in histopathology].

Authors:  G Haroske; T Kramm; M Mörz; M Oberholzer
Journal:  Pathologe       Date:  2010-09       Impact factor: 1.011

2.  BioMediator data integration: beyond genomics to neuroscience data.

Authors:  K Wang; P Tarczy-Hornoch; R Shaker; P Mork; J F Brinkley
Journal:  AMIA Annu Symp Proc       Date:  2005

3.  Heterogeneous biomedical database integration using a hybrid strategy: a p53 cancer research database.

Authors:  Vadim Y Bichutskiy; Richard Colman; Rainer K Brachmann; Richard H Lathrop
Journal:  Cancer Inform       Date:  2007-02-20

4.  Using commercially available tools for multifaceted health assessment: data integration lessons learned.

Authors:  Katarzyna Wilamowska; Thai Le; George Demiris; Hilaire Thompson
Journal:  Comput Inform Nurs       Date:  2013-07       Impact factor: 1.985

5.  Remote data retrieval for bioinformatics applications: an agent migration approach.

Authors:  Lei Gao; Hua Dai; Tong-Liang Zhang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2011-06-20       Impact factor: 3.240

6.  Developing a European grid infrastructure for cancer research: vision, architecture and services.

Authors:  M Tsiknakis; S Rueping; L Martin; S Sfakianakis; A Bucur; T Sengstag; M Brochhausen; J Pucaski; N Graf
Journal:  Ecancermedicalscience       Date:  2007-09-21

7.  Improving bioinformatics software quality through incorporation of software engineering practices.

Authors:  Adeeb Noor
Journal:  PeerJ Comput Sci       Date:  2022-01-05
  7 in total

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