Literature DB >> 15189160

Using protein folding rates to test protein folding theories.

Blake Gillespie1, Kevin W Plaxco.   

Abstract

The fastest simple, kinetically two-state protein folds a million times more rapidly than the slowest. Here we review many recent theories of protein folding kinetics in terms of their ability to qualitatively rationalize, if not quantitatively predict, this fundamental experimental observation.

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Year:  2004        PMID: 15189160     DOI: 10.1146/annurev.biochem.73.011303.073904

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  20 in total

1.  Folding of the protein domain hbSBD.

Authors:  Maksim Kouza; Chi-Fon Chang; Shura Hayryan; Tsan-hung Yu; Mai Suan Li; Tai-huang Huang; Chin-Kun Hu
Journal:  Biophys J       Date:  2005-08-26       Impact factor: 4.033

2.  A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling.

Authors:  Stefan Wallin; Hue Sun Chan
Journal:  Protein Sci       Date:  2005-06       Impact factor: 6.725

3.  Role of unfolded state heterogeneity and en-route ruggedness in protein folding kinetics.

Authors:  Paul A Ellison; Silvia Cavagnero
Journal:  Protein Sci       Date:  2006-03       Impact factor: 6.725

4.  Cooperativity and the origins of rapid, single-exponential kinetics in protein folding.

Authors:  Patrícia F N Faísca; Kevin W Plaxco
Journal:  Protein Sci       Date:  2006-07       Impact factor: 6.725

5.  Reversible thermal denaturation of a 60-kDa genetically engineered beta-sheet polypeptide.

Authors:  Igor K Lednev; Vladimir V Ermolenkov; Seiichiro Higashiya; Ludmila A Popova; Natalya I Topilina; John T Welch
Journal:  Biophys J       Date:  2006-08-04       Impact factor: 4.033

Review 6.  GroEL-mediated protein folding: making the impossible, possible.

Authors:  Zong Lin; Hays S Rye
Journal:  Crit Rev Biochem Mol Biol       Date:  2006 Jul-Aug       Impact factor: 8.250

7.  Closed-loop control of cellular functions using combinatory drugs guided by a stochastic search algorithm.

Authors:  Pak Kin Wong; Fuqu Yu; Arash Shahangian; Genhong Cheng; Ren Sun; Chih-Ming Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-20       Impact factor: 11.205

8.  A comparison of the folding kinetics of a small, artificially selected DNA aptamer with those of equivalently simple naturally occurring proteins.

Authors:  Camille Lawrence; Alexis Vallée-Bélisle; Shawn H Pfeil; Derek de Mornay; Everett A Lipman; Kevin W Plaxco
Journal:  Protein Sci       Date:  2013-11-28       Impact factor: 6.725

9.  Microsecond acquisition of heterogeneous structure in the folding of a TIM barrel protein.

Authors:  Ying Wu; Elena Kondrashkina; Can Kayatekin; C Robert Matthews; Osman Bilsel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-29       Impact factor: 11.205

Review 10.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

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