Literature DB >> 15189157

Mechanical processes in biochemistry.

Carlos Bustamante1, Yann R Chemla, Nancy R Forde, David Izhaky.   

Abstract

Mechanical processes are involved in nearly every facet of the cell cycle. Mechanical forces are generated in the cell during processes as diverse as chromosomal segregation, replication, transcription, translation, translocation of proteins across membranes, cell locomotion, and catalyzed protein and nucleic acid folding and unfolding, among others. Because force is a product of all these reactions, biochemists are beginning to directly apply external forces to these processes to alter the extent or even the fate of these reactions hoping to reveal their underlying molecular mechanisms. This review provides the conceptual framework to understand the role of mechanical force in biochemistry.

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Year:  2004        PMID: 15189157     DOI: 10.1146/annurev.biochem.72.121801.161542

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  226 in total

1.  Bidirectional intracellular transport: utility and mechanism.

Authors:  Amber L Jolly; Vladimir I Gelfand
Journal:  Biochem Soc Trans       Date:  2011-10       Impact factor: 5.407

2.  Computational investigation of the effect of thermal perturbation on the mechanical unfolding of titin I27.

Authors:  Navneet Bung; U Deva Priyakumar
Journal:  J Mol Model       Date:  2011-11-27       Impact factor: 1.810

3.  Colored noise in the fluctuations of an extended DNA molecule detected by optical trapping.

Authors:  Ignacio A Martínez; Saurabh Raj; Dmitri Petrov
Journal:  Eur Biophys J       Date:  2011-11-02       Impact factor: 1.733

4.  The molten globule state is unusually deformable under mechanical force.

Authors:  Phillip J Elms; John D Chodera; Carlos Bustamante; Susan Marqusee
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

5.  Direct observation of multiple misfolding pathways in a single prion protein molecule.

Authors:  Hao Yu; Xia Liu; Krishna Neupane; Amar Nath Gupta; Angela M Brigley; Allison Solanki; Iveta Sosova; Michael T Woodside
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-15       Impact factor: 11.205

6.  Single-molecule observation of helix staggering, sliding, and coiled coil misfolding.

Authors:  Zhiqun Xi; Ying Gao; George Sirinakis; Honglian Guo; Yongli Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

7.  Mechanistic constraints from the substrate concentration dependence of enzymatic fluctuations.

Authors:  Jeffrey R Moffitt; Yann R Chemla; Carlos Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-20       Impact factor: 11.205

8.  DNA sequencing: detecting methylation with force.

Authors:  Piotr E Marszalek
Journal:  Nat Nanotechnol       Date:  2010-11       Impact factor: 39.213

9.  Functional modes and residue flexibility control the anisotropic response of guanylate kinase to mechanical stress.

Authors:  Sophie Sacquin-Mora; Olivier Delalande; Marc Baaden
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

10.  Proteins Breaking Bad: A Free Energy Perspective.

Authors:  Jessica Valle-Orero; Rafael Tapia-Rojo; Edward C Eckels; Jaime Andrés Rivas-Pardo; Ionel Popa; Julio M Fernández
Journal:  J Phys Chem Lett       Date:  2017-07-25       Impact factor: 6.475

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