Literature DB >> 15184651

Myosin subfragment 1 structures reveal a partially bound nucleotide and a complex salt bridge that helps couple nucleotide and actin binding.

Dipesh Risal1, S Gourinath, Daniel M Himmel, Andrew G Szent-Györgyi, Carolyn Cohen.   

Abstract

Structural studies of myosin have indicated some of the conformational changes that occur in this protein during the contractile cycle, and we have now observed a conformational change in a bound nucleotide as well. The 3.1-A x-ray structure of the scallop myosin head domain (subfragment 1) in the ADP-bound near-rigor state (lever arm =45 degrees to the helical actin axis) shows the diphosphate moiety positioned on the surface of the nucleotide-binding pocket, rather than deep within it as had been observed previously. This conformation strongly suggests a specific mode of entry and exit of the nucleotide from the nucleotide-binding pocket through the so-called "front door." In addition, using a variety of scallop structures, including a relatively high-resolution 2.75-A nucleotide-free near-rigor structure, we have identified a conserved complex salt bridge connecting the 50-kDa upper and N-terminal subdomains. This salt bridge is present only in crystal structures of muscle myosin isoforms that exhibit a strong reciprocal relationship (also known as coupling) between actin and nucleotide affinity.

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Year:  2004        PMID: 15184651      PMCID: PMC428449          DOI: 10.1073/pnas.0403002101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Salt bridge stability in monomeric proteins.

Authors:  S Kumar; R Nussinov
Journal:  J Mol Biol       Date:  1999-11-12       Impact factor: 5.469

2.  A structural model for actin-induced nucleotide release in myosin.

Authors:  Thomas F Reubold; Susanne Eschenburg; Andreas Becker; F Jon Kull; Dietmar J Manstein
Journal:  Nat Struct Biol       Date:  2003-09-21

3.  A structural state of the myosin V motor without bound nucleotide.

Authors:  Pierre-Damien Coureux; Amber L Wells; Julie Ménétrey; Christopher M Yengo; Carl A Morris; H Lee Sweeney; Anne Houdusse
Journal:  Nature       Date:  2003-09-25       Impact factor: 49.962

4.  Kinetic mechanism and regulation of myosin VI.

Authors:  E M De La Cruz; E M Ostap; H L Sweeney
Journal:  J Biol Chem       Date:  2001-06-22       Impact factor: 5.157

5.  Kinetic analysis of Dictyostelium discoideum myosin motor domains with glycine-to-alanine mutations in the reactive thiol region.

Authors:  R Batra; M A Geeves; D J Manstein
Journal:  Biochemistry       Date:  1999-05-11       Impact factor: 3.162

6.  Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.

Authors:  G J Kleywegt; T Bergfors; H Senn; P Le Motte; B Gsell; K Shudo; T A Jones
Journal:  Structure       Date:  1994-12-15       Impact factor: 5.006

7.  X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-.

Authors:  A J Fisher; C A Smith; J B Thoden; R Smith; K Sutoh; H M Holden; I Rayment
Journal:  Biochemistry       Date:  1995-07-18       Impact factor: 3.162

8.  Kinetic analysis of Drosophila muscle myosin isoforms suggests a novel mode of mechanochemical coupling.

Authors:  Becky M Miller; Miklós Nyitrai; Sanford I Bernstein; Michael A Geeves
Journal:  J Biol Chem       Date:  2003-09-22       Impact factor: 5.157

9.  Three-dimensional structure of myosin subfragment-1: a molecular motor.

Authors:  I Rayment; W R Rypniewski; K Schmidt-Bäse; R Smith; D R Tomchick; M M Benning; D A Winkelmann; G Wesenberg; H M Holden
Journal:  Science       Date:  1993-07-02       Impact factor: 47.728

10.  Kinetic characterization of a cytoplasmic myosin motor domain expressed in Dictyostelium discoideum.

Authors:  M D Ritchie; M A Geeves; S K Woodward; D J Manstein
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205

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  29 in total

1.  Role of insert-1 of myosin VI in modulating nucleotide affinity.

Authors:  Olena Pylypenko; Lin Song; Gaelle Squires; Xiaoyan Liu; Alan B Zong; Anne Houdusse; H Lee Sweeney
Journal:  J Biol Chem       Date:  2011-01-29       Impact factor: 5.157

2.  Orientation of the N-terminal lobe of the myosin regulatory light chain in skeletal muscle fibers.

Authors:  Daniela Romano; Birgit D Brandmeier; Yin-Biao Sun; David R Trentham; Malcolm Irving
Journal:  Biophys J       Date:  2012-03-20       Impact factor: 4.033

3.  Visualizing key hinges and a potential major source of compliance in the lever arm of myosin.

Authors:  Jerry H Brown; V S Senthil Kumar; Elizabeth O'Neall-Hennessey; Ludmila Reshetnikova; Howard Robinson; Michelle Nguyen-McCarty; Andrew G Szent-Györgyi; Carolyn Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-13       Impact factor: 11.205

4.  Myo1c mutations associated with hearing loss cause defects in the interaction with nucleotide and actin.

Authors:  Nancy Adamek; Michael A Geeves; Lynne M Coluccio
Journal:  Cell Mol Life Sci       Date:  2010-07-17       Impact factor: 9.261

5.  An alternative domain near the ATP binding pocket of Drosophila myosin affects muscle fiber kinetics.

Authors:  Douglas M Swank; Joan Braddock; Waylon Brown; Heather Lesage; Sanford I Bernstein; David W Maughan
Journal:  Biophys J       Date:  2006-01-06       Impact factor: 4.033

6.  Isolation and characterization of class II myosin genes from Haemonchus contortus.

Authors:  S Nikolaou; M Hu; N B Chilton; D Hartman; A J Nisbet; P J A Presidente; R B Gasser
Journal:  Parasitol Res       Date:  2006-03-18       Impact factor: 2.289

7.  Myoinformatics report: myosin regulatory light chain paralogs in the human genome.

Authors:  John H Collins
Journal:  J Muscle Res Cell Motil       Date:  2006-03-15       Impact factor: 2.698

8.  An unstable head-rod junction may promote folding into the compact off-state conformation of regulated myosins.

Authors:  Jerry H Brown; Yuting Yang; Ludmilla Reshetnikova; S Gourinath; Dániel Süveges; József Kardos; Fruzsina Hóbor; Robbie Reutzel; László Nyitray; Carolyn Cohen
Journal:  J Mol Biol       Date:  2007-11-28       Impact factor: 5.469

9.  Mammalian myosin-18A, a highly divergent myosin.

Authors:  Stephanie Guzik-Lendrum; Sarah M Heissler; Neil Billington; Yasuharu Takagi; Yi Yang; Peter J Knight; Earl Homsher; James R Sellers
Journal:  J Biol Chem       Date:  2013-02-04       Impact factor: 5.157

10.  Structure of the preamyloid dimer of beta-2-microglobulin from covalent labeling and mass spectrometry.

Authors:  Vanessa Leah Mendoza; Kwasi Antwi; Mario A Barón-Rodríguez; Cristian Blanco; Richard W Vachet
Journal:  Biochemistry       Date:  2010-02-23       Impact factor: 3.162

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